RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 UPF1Q92900 1129 aaKnown RBP eCLIP11.44□□□□□ -0.583e-7■■■■■ 30.9
BRF1-204ENST00000392557 SYT11Q9BT88 431 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 MSTO1Q9BUK6 570 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 OSBPL8Q9BZF1 889 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 LRRC19Q9H756 370 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 AAASQ9NRG9 546 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 AGO2Q9UKV8 859 aaKnown RBP11.44□□□□□ -0.58
BRF1-204ENST00000392557 LAMA2P24043 3122 aaKnown RBP11.44□□□□□ -0.58
BRF1-204ENST00000392557 BHMG1C9JSJ3 638 aaPredicted RBP11.44□□□□□ -0.58
BRF1-204ENST00000392557 STBD1O95210 358 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 CETPP11597 493 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 GLRA2P23416 452 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 PIK3CAP42336 1068 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 NOP14P78316 857 aaKnown RBP11.44□□□□□ -0.58
BRF1-204ENST00000392557 TMEM63BQ5T3F8 832 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 GJC2Q5T442 439 aaPredicted RBP11.44□□□□□ -0.58
BRF1-204ENST00000392557 FYB2Q5VWT5 728 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 MFSD5Q6N075 450 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 TMEM270Q6UE05 265 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 DPH6Q7L8W6 267 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 TAS1R3Q7RTX0 852 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 ERO1BQ86YB8 467 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 DNERQ8NFT8 737 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 VTI1AQ96AJ9 217 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 MAGEB18Q96M61 343 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 CFAP57Q96MR6 1250 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 DCLK3Q9C098 648 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 TMEM8AQ9HCN3 771 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 NOCTQ9UK39 431 aaKnown RBP11.44□□□□□ -0.58
BRF1-204ENST00000392557 NEU2Q9Y3R4 380 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 PCDHB4Q9Y5E5 795 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 TLR3O15455 904 aaKnown RBP11.44□□□□□ -0.58
BRF1-204ENST00000392557 GJB1P08034 283 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 ETS1P14921 441 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 YBX3P16989 372 aaKnown RBP eCLIP11.44□□□□□ -0.58
BRF1-204ENST00000392557 ARSEP51690 589 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 HSDL1Q3SXM5 330 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 ATP13A4Q4VNC1 1196 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 RIOX2Q8IUF8 465 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 NRBP2Q9NSY0 501 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 AGTPBP1Q9UPW5 1226 aa11.44□□□□□ -0.58
BRF1-204ENST00000392557 NFASCO94856 1347 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 FARP2O94887 1054 aaPredicted RBP11.43□□□□□ -0.58
BRF1-204ENST00000392557 ARIH2O95376 493 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 FOXN2P32314 431 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 LMNTD2Q8IXW0 634 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 PPP1R13LQ8WUF5 828 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 MCUR1Q96AQ8 359 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 NLRP4Q96MN2 994 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 SENP7Q9BQF6 1050 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 OSBPL1AQ9BXW6 950 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 ST6GALNAC4Q9H4F1 302 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 UBN1Q9NPG3 1134 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 CSDE1O75534 798 aaKnown RBP11.43□□□□□ -0.58
BRF1-204ENST00000392557 STAM2O75886 525 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 KRT1P04264 644 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 EPHB2P29323 1055 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 WNT7BP56706 349 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 STAT4Q14765 748 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 PKN2Q16513 984 aaKnown RBP11.43□□□□□ -0.58
BRF1-204ENST00000392557 BRDTQ58F21 947 aaPredicted RBP11.43□□□□□ -0.58
BRF1-204ENST00000392557 C12orf56Q8IXR9 622 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 OLIG1Q8TAK6 271 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 ZNF570Q96NI8 536 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 MMP19Q99542 508 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 HERPUD2Q9BSE4 406 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 SYT17Q9BSW7 474 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 RBAKQ9NYW8 714 aaPredicted RBP11.43□□□□□ -0.58
BRF1-204ENST00000392557 IKBKGQ9Y6K9 419 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 LRRD1A4D1F6 860 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 CFAP69A5D8W1 941 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 EPHX2P34913 555 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 PDIA2Q13087 525 aaKnown RBP11.43□□□□□ -0.58
BRF1-204ENST00000392557 MTFR1Q15390 333 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 RHPN2Q8IUC4 686 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 RHOT1Q8IXI2 618 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 VPS52Q8N1B4 723 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 PRPF31Q8WWY3 499 aaKnown RBP11.43□□□□□ -0.58
BRF1-204ENST00000392557 SPATA33Q96N06 139 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 TMEM109Q9BVC6 243 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 ZFP69BQ9UJL9 534 aa11.43□□□□□ -0.58
BRF1-204ENST00000392557 FSCN2O14926 492 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 BANF1O75531 89 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 UNC5CO95185 931 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 CYP1A2P05177 515 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 TAC1P20366 129 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 RASSF2P50749 326 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 MXRA7P84157 204 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 CAV1Q03135 178 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 RIPK1Q13546 671 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 FAM160B1Q5W0V3 765 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 RNF149Q8NC42 400 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 BBOF1Q8ND07 529 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 SEPT1Q8WYJ6 367 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 SHC3Q92529 594 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 C10orf88Q9H8K7 445 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 EBF2Q9HAK2 575 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 C17orf75Q9HAS0 396 aa11.42□□□□□ -0.58
BRF1-204ENST00000392557 USH1CQ9Y6N9 552 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms