RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 DDR2Q16832 855 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 FAM83EQ2M2I3 478 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 RAVER2Q9HCJ3 691 aaKnown RBP15.34■□□□□ 0.05
CCDC50-201ENST00000392455 TBC1D22BQ9NU19 505 aa15.34■□□□□ 0.05
CCDC50-201ENST00000392455 PGM3O95394 542 aa15.33■□□□□ 0.05
CCDC50-201ENST00000392455 DCAF4L1Q3SXM0 396 aa15.33■□□□□ 0.05
CCDC50-201ENST00000392455 TTC39BQ5VTQ0 682 aaPredicted RBP15.33■□□□□ 0.05
CCDC50-201ENST00000392455 C2orf69Q8N8R5 385 aa15.33■□□□□ 0.05
CCDC50-201ENST00000392455 PRDM5Q9NQX1 630 aaPredicted RBP15.33■□□□□ 0.05
CCDC50-201ENST00000392455 SMIM22K7EJ46 135 aa15.33■□□□□ 0.05
CCDC50-201ENST00000392455 TSPAN9O75954 239 aa15.33■□□□□ 0.05
CCDC50-201ENST00000392455 S100A6P06703 90 aa15.33■□□□□ 0.05
CCDC50-201ENST00000392455 CRKP46108 304 aa15.33■□□□□ 0.05
CCDC50-201ENST00000392455 BTN2A1Q7KYR7 527 aa15.33■□□□□ 0.05
CCDC50-201ENST00000392455 OR8H2Q8N162 312 aa15.33■□□□□ 0.05
CCDC50-201ENST00000392455 SNX31Q8N9S9 440 aa15.33■□□□□ 0.05
CCDC50-201ENST00000392455 LDOC1O95751 146 aaPredicted RBP15.33■□□□□ 0.04
CCDC50-201ENST00000392455 MSH3P20585 1137 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 PDIA2Q13087 525 aaKnown RBP15.33■□□□□ 0.04
CCDC50-201ENST00000392455 RNF135Q8IUD6 432 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 MRPL4Q9BYD3 311 aaKnown RBP15.33■□□□□ 0.04
CCDC50-201ENST00000392455 OSBPL8Q9BZF1 889 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 KLHL28Q9NXS3 571 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 RAD54BQ9Y620 910 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 SOAT2O75908 522 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 ASNSP08243 561 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 STAT3P40763 770 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 KLHL17Q6TDP4 642 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 ATL2Q8NHH9 583 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 TUBA8Q9NY65 449 aaPredicted RBP15.33■□□□□ 0.04
CCDC50-201ENST00000392455 MYL12AP19105 171 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 NRG3P56975 720 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 PIGHQ14442 188 aaPredicted RBP15.33■□□□□ 0.04
CCDC50-201ENST00000392455 RESP18Q5W5W9 173 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 TMEM270Q6UE05 265 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 C10orf53Q8N6V4 93 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 ZNF564Q8TBZ8 553 aaPredicted RBP15.33■□□□□ 0.04
CCDC50-201ENST00000392455 PGBD4Q96DM1 585 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 HEMGNQ9BXL5 484 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 CATSPERBQ9H7T0 1116 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 ATP6V1HQ9UI12 483 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 FEM1BQ9UK73 627 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 TMEM94Q12767 1356 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 CNPP09543 421 aaKnown RBP15.33■□□□□ 0.04
CCDC50-201ENST00000392455 MZT2BQ6NZ67 158 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 ANKARQ7Z5J8 1434 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 FAM220BPB1ANY3 271 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 CLTBP09497 229 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 ATN1P54259 1190 aaPredicted RBP15.33■□□□□ 0.04
CCDC50-201ENST00000392455 CHRNB3Q05901 458 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 NME3Q13232 169 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 GNA13Q14344 377 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 CCDC137Q6PK04 289 aaKnown RBP15.33■□□□□ 0.04
CCDC50-201ENST00000392455 MASTLQ96GX5 879 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 VTA1Q9NP79 307 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 MGAT4AQ9UM21 535 aa15.33■□□□□ 0.04
CCDC50-201ENST00000392455 PLOD1Q02809 727 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 MCCC1Q96RQ3 725 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 FAM213AQ9BRX8 229 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 AFF4Q9UHB7 1163 aaKnown RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 E9PBE3 544 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 POLBP06746 335 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 TMEM154Q6P9G4 183 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 STAG2Q8N3U4 1231 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ADAMTS1Q9UHI8 967 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ATPIF1Q9UII2 106 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 GRID1Q9ULK0 1009 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 YWHAQP27348 245 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 TPI1P60174 286 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ITGA9Q13797 1035 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 PREPLQ4J6C6 727 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 STK39Q9UEW8 545 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 A0A1W2PRG6 482 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 FDX1P10109 184 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ATPAF2Q8N5M1 289 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ZNF579Q8NAF0 562 aaKnown RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 HPS3Q969F9 1004 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 FRMD8P1Q9BZ68 369 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 AKAP7Q9P0M2 348 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 UNC13DQ70J99 1090 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 SFR1Q86XK3 245 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 FOXP4Q8IVH2 680 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ALDH6A1Q02252 535 aaKnown RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 SUSD4Q5VX71 490 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 CLMNQ96JQ2 1002 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ROPN1BQ9BZX4 212 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 WDR41Q9HAD4 459 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ROPN1Q9HAT0 212 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ABCB6Q9NP58 842 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 KRT34O76011 436 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ENO1P06733 434 aaKnown RBP15.32■□□□□ 0.04
CCDC50-201ENST00000392455 GNA15P30679 374 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 TRIM48Q8IWZ4 208 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ARHGEF26Q96DR7 871 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 ZNF302Q9NR11 478 aa15.32■□□□□ 0.04
CCDC50-201ENST00000392455 TCP11X1B4DZS4 312 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 PSTPIP1O43586 416 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 MGRN1O60291 552 aa15.31■□□□□ 0.04
CCDC50-201ENST00000392455 SOAT1P35610 550 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms