RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 DEPDC1BQ8WUY9 529 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 DHX58Q96C10 678 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 MTMR12Q9C0I1 747 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 IL21Q9HBE4 155 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 L1RE1Q9UN81 338 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 PTPRJQ12913 1337 aa17.88■□□□□ 0.45
PTPRK-208ENST00000392449 KIF26AQ9ULI4 1882 aaPredicted RBP17.87■□□□□ 0.45
PTPRK-208ENST00000392449 SLC38A8A6NNN8 435 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 GARTP22102 1010 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 PAX3P23760 479 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 CCNE1P24864 410 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 HOXD13P35453 343 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 POU5F1Q01860 360 aaKnown RBP17.87■□□□□ 0.45
PTPRK-208ENST00000392449 BFSP1Q12934 665 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 SDHAF4Q5VUM1 108 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 ZC3H14Q6PJT7 736 aaKnown RBP17.87■□□□□ 0.45
PTPRK-208ENST00000392449 SHC4Q6S5L8 630 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 PDCL2Q8N4E4 241 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 DCLK2Q8N568 766 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 FAM3CQ92520 227 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 ZNF560Q96MR9 790 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 SIX4Q9UIU6 781 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 MRPS17Q9Y2R5 130 aaKnown RBP17.87■□□□□ 0.45
PTPRK-208ENST00000392449 ASB3Q9Y575 518 aa17.87■□□□□ 0.45
PTPRK-208ENST00000392449 OBSL1O75147 1896 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 GPR179Q6PRD1 2367 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 EXTL3O43909 919 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 KRT19P08727 400 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 HAPLN1P10915 354 aaPredicted RBP17.86■□□□□ 0.45
PTPRK-208ENST00000392449 CASP1P29466 404 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 RPS9P46781 194 aaKnown RBP17.86■□□□□ 0.45
PTPRK-208ENST00000392449 TUFMP49411 452 aaKnown RBP17.86■□□□□ 0.45
PTPRK-208ENST00000392449 ITIH5Q86UX2 942 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 OSTM1Q86WC4 334 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 NT5DC4Q86YG4 428 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 CCDC65Q8IXS2 484 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 YAF2Q8IY57 180 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 CSGALNACT2Q8N6G5 542 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 NELL2Q99435 816 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 PI4K2AQ9BTU6 479 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 GPR88Q9GZN0 384 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 HSFX1Q9UBD0 423 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 OTOGLQ3ZCN5 2332 aa17.86■□□□□ 0.45
PTPRK-208ENST00000392449 DENND4CQ5VZ89 1909 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 FCHO2Q0JRZ9 810 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 ALCAMQ13740 583 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 VEPH1Q14D04 833 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 WDR44Q5JSH3 913 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 TMEM150AQ86TG1 271 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 CBWD2Q8IUF1 395 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 SUMF1Q8NBK3 374 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 OR5B17Q8NGF7 314 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 HINFPQ9BQA5 517 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 TRIM9Q9C026 710 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 TNMDQ9H2S6 317 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 TRPV5Q9NQA5 729 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 RBM12Q9NTZ6 932 aaKnown RBP17.85■□□□□ 0.45
PTPRK-208ENST00000392449 KBTBD4Q9NVX7 518 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 DDX43Q9NXZ2 648 aaKnown RBP17.85■□□□□ 0.45
PTPRK-208ENST00000392449 GTSE1Q9NYZ3 720 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 FBXO4Q9UKT5 387 aa17.85■□□□□ 0.45
PTPRK-208ENST00000392449 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.84■□□□□ 0.45
PTPRK-208ENST00000392449 MAN2B1O00754 1011 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 NCAM2O15394 837 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 PPP6R2O75170 966 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 LDHAP00338 332 aaKnown RBP17.84■□□□□ 0.45
PTPRK-208ENST00000392449 PNPLA4P41247 253 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 MAGEA9P43362 315 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 ASIC1P78348 528 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 TNK2Q07912 1038 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 PKP1Q13835 747 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 ZNF528Q3MIS6 628 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 TXNDC11Q6PKC3 985 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 KIAA2013Q8IYS2 634 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 GPD1LQ8N335 351 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 SPPL2BQ8TCT7 592 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 ZNF396Q96N95 335 aaPredicted RBP17.84■□□□□ 0.45
PTPRK-208ENST00000392449 SLC46A2Q9BY10 475 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 SEMA4AQ9H3S1 761 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 TMEM206Q9H813 350 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 LMAN1LQ9HAT1 526 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 PRMT8Q9NR22 394 aaPredicted RBP17.84■□□□□ 0.45
PTPRK-208ENST00000392449 PCDHB5Q9Y5E4 795 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 SNX9Q9Y5X1 595 aa17.84■□□□□ 0.45
PTPRK-208ENST00000392449 CHADO15335 359 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 KINO60870 393 aaKnown RBP17.83■□□□□ 0.45
PTPRK-208ENST00000392449 TMEM191BP0C7N4 346 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 HMGA1P17096 107 aaKnown RBP17.83■□□□□ 0.45
PTPRK-208ENST00000392449 KPNA1P52294 538 aaPredicted RBP17.83■□□□□ 0.45
PTPRK-208ENST00000392449 GAS6Q14393 721 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 TAF12Q16514 161 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 ARHGAP15Q53QZ3 475 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 DCP1BQ8IZD4 617 aaKnown RBP17.83■□□□□ 0.45
PTPRK-208ENST00000392449 SPRYD3Q8NCJ5 442 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 CSGALNACT1Q8TDX6 532 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 CACTINQ8WUQ7 758 aaKnown RBP17.83■□□□□ 0.45
PTPRK-208ENST00000392449 E2F7Q96AV8 911 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 CHRDQ9H2X0 955 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 TASP1Q9H6P5 420 aa17.83■□□□□ 0.45
PTPRK-208ENST00000392449 GTF3C4Q9UKN8 822 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms