RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 VRTNQ9H8Y1 702 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 TMLHEQ9NVH6 421 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 SLC27A5Q9Y2P5 690 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 MRPS23Q9Y3D9 190 aaKnown RBP12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 ASB3Q9Y575 518 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 SNX9Q9Y5X1 595 aa12.24□□□□□ -0.45
IGHV4-28-201ENST00000390612 LRRIQ3A6PVS8 624 aaPredicted RBP12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 ZNF197O14709 1029 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 NARSO43776 548 aaKnown RBP12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 KIF20AO95235 890 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 PDGFBP01127 241 aaPredicted RBP12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 HAPLN1P10915 354 aaPredicted RBP12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 SRFP11831 508 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 CEBPBP17676 345 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 LHX1P48742 406 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 TUFMP49411 452 aaKnown RBP12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 AP3M2P53677 418 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 ENPEPQ07075 957 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 MYO1EQ12965 1108 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 PLD1Q13393 1074 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 PNOCQ13519 176 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 FAM171BQ6P995 826 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 DCP1BQ8IZD4 617 aaKnown RBP12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 SPPL2BQ8TCT7 592 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 TMC2Q8TDI7 906 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 PSMG2Q969U7 264 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 GSDMAQ96QA5 445 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 SLC2A4RGQ9NR83 387 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 DDX43Q9NXZ2 648 aaKnown RBP12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 WNT16Q9UBV4 365 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 NUMBLQ9Y6R0 609 aa12.23□□□□□ -0.45
IGHV4-28-201ENST00000390612 MIA3Q5JRA6 1907 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 GOLGA6L4A6NEF3 574 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 IKBKBO14920 756 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 CALUO43852 315 aaPredicted RBP12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 TACC1O75410 805 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 SOAT2O75908 522 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 VNN1O95497 513 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 ATF6P18850 670 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 WARSP23381 471 aaKnown RBP12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 FCARP24071 287 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 ALDH1A3P47895 512 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 EPHB3P54753 998 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 DLG4P78352 724 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 NFE2Q16621 373 aaPredicted RBP12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 ZACNQ401N2 412 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 INTS6LQ5JSJ4 861 aaKnown RBP12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 CYP4A22Q5TCH4 519 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 TDRD10Q5VZ19 366 aaKnown RBP12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 IQCEQ6IPM2 695 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 MTSS1LQ765P7 747 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 DNAJB7Q7Z6W7 309 aaPredicted RBP12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 ADGRF2Q8IZF7 708 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 ELMOD1Q8N336 334 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 SHKBP1Q8TBC3 707 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 ING5Q8WYH8 240 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 MCRS1Q96EZ8 462 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 CCDC34Q96HJ3 373 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 KCNH6Q9H252 994 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 TRPV4Q9HBA0 871 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 ZNF334Q9HCZ1 680 aaPredicted RBP12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 ABCB6Q9NP58 842 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 MAPK8IP1Q9UQF2 711 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 NME7Q9Y5B8 376 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 PCDHA5Q9Y5H7 936 aa12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 KIF26AQ9ULI4 1882 aaPredicted RBP12.22□□□□□ -0.45
IGHV4-28-201ENST00000390612 COL4A2P08572 1712 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 HCRTO43612 131 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 GADD45BO75293 160 aaPredicted RBP12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 ECI2O75521 394 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 AKAP3O75969 853 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 NPR3P17342 541 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 LMO2P25791 158 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 PCSK1P29120 753 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 ATICP31939 592 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 PRCPP42785 496 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 MYL6P60660 151 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 MYL7Q01449 175 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 TSPY1Q01534 308 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 EDRF1Q3B7T1 1238 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 ZNF658Q5TYW1 1059 aaPredicted RBP12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 GAREM2Q75VX8 874 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 PDZD4Q76G19 769 aaPredicted RBP12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 ZC3H3Q8IXZ2 948 aaKnown RBP12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 SMYD4Q8IYR2 804 aaPredicted RBP12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 ZSWIM3Q96MP5 696 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 ASB16Q96NS5 453 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 MKNK1Q9BUB5 465 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 PLA2G2FQ9BZM2 168 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 IL21Q9HBE4 155 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 ASAH2Q9NR71 780 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 GTF3C4Q9UKN8 822 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 PCDHB5Q9Y5E4 795 aa12.21□□□□□ -0.45
IGHV4-28-201ENST00000390612 TICRRQ7Z2Z1 1910 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 MYBPHLA2RUH7 354 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 KRBA1A5PL33 1030 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 TULP1O00294 542 aaPredicted RBP12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 HMGA1P17096 107 aaKnown RBP12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 NR2F2P24468 414 aa12.2□□□□□ -0.46
IGHV4-28-201ENST00000390612 ACAT1P24752 427 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms