RNA–Protein interactions for RNA: ENST00000380569.6

GCOM1-202, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GCOM1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-202ENST00000380569 PIGHQ14442 188 aaPredicted RBP20.25■□□□□ 0.83
GCOM1-202ENST00000380569 TMEM132DQ14C87 1099 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 NIPA2Q8N8Q9 360 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 C2orf69Q8N8R5 385 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 NPLOC4Q8TAT6 608 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 RNF25Q96BH1 459 aaPredicted RBP20.25■□□□□ 0.83
GCOM1-202ENST00000380569 SCLT1Q96NL6 688 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 SMYD3Q9H7B4 428 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 SLC15A5A6NIM6 579 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 ITIH2P19823 946 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 IFFO1Q0D2I5 559 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 NFX1Q12986 1120 aaKnown RBP20.25■□□□□ 0.83
GCOM1-202ENST00000380569 SLMAPQ14BN4 828 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 CYP4A22Q5TCH4 519 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 ANKS1BQ7Z6G8 1248 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 SLC4A11Q8NBS3 891 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 RBM41Q96IZ5 413 aaKnown RBP20.25■□□□□ 0.83
GCOM1-202ENST00000380569 ACAP3Q96P50 834 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 C2CD2Q9Y426 696 aa20.25■□□□□ 0.83
GCOM1-202ENST00000380569 F8VP50 259 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 CILPO75339 1184 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 GAS8O95995 478 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 RARGP13631 454 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 P4HA1P13674 534 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 TCF4P15884 667 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 IVDP26440 423 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 KRT71Q3SY84 523 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 PTPN20Q4JDL3 420 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 ATP13A4Q4VNC1 1196 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 DENND2CQ68D51 928 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 ARFGAP2Q8N6H7 521 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 ADPGKQ9BRR6 497 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 ELOVL4Q9GZR5 314 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 ASIC3Q9UHC3 531 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 CYTH4Q9UIA0 394 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 ITGA11Q9UKX5 1188 aa20.24■□□□□ 0.83
GCOM1-202ENST00000380569 RRN3P2A6NIE6 340 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 TP73O15350 636 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 ADCY6O43306 1168 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 PTPN11Q06124 597 aaPredicted RBP20.23■□□□□ 0.83
GCOM1-202ENST00000380569 PDCLQ13371 301 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 TTC19Q6DKK2 380 aaPredicted RBP20.23■□□□□ 0.83
GCOM1-202ENST00000380569 NT5DC4Q86YG4 428 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 SNF8Q96H20 258 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 TMEM176AQ96HP8 235 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 HPDLQ96IR7 371 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 SLITRK1Q96PX8 696 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 TWNKQ96RR1 684 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 SEMA4AQ9H3S1 761 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 BCCIPQ9P287 314 aaKnown RBP eCLIP20.23■□□□□ 0.83
GCOM1-202ENST00000380569 AGAP1Q9UPQ3 857 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 NEU2Q9Y3R4 380 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 SIGLEC16A6NMB1 481 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 STAU1O95793 577 aaKnown RBP20.23■□□□□ 0.83
GCOM1-202ENST00000380569 SHBGP04278 402 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 GRM5P41594 1212 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 FOXR1Q6PIV2 292 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 RHBDF2Q6PJF5 856 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 LRRC4CQ9HCJ2 640 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 SETD4Q9NVD3 440 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 DPP3Q9NY33 737 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 SLC5A4Q9NY91 659 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 HMGXB4Q9UGU5 601 aa20.23■□□□□ 0.83
GCOM1-202ENST00000380569 CITO14578 2027 aa20.22■□□□□ 0.83
GCOM1-202ENST00000380569 KRT1P04264 644 aa20.22■□□□□ 0.83
GCOM1-202ENST00000380569 GSCP56915 257 aaPredicted RBP20.22■□□□□ 0.83
GCOM1-202ENST00000380569 COPS2P61201 443 aa20.22■□□□□ 0.83
GCOM1-202ENST00000380569 RBP5P82980 135 aa20.22■□□□□ 0.83
GCOM1-202ENST00000380569 SLC29A2Q14542 456 aa20.22■□□□□ 0.83
GCOM1-202ENST00000380569 HOOK3Q86VS8 718 aa20.22■□□□□ 0.83
GCOM1-202ENST00000380569 CCDC114Q96M63 670 aa20.22■□□□□ 0.83
GCOM1-202ENST00000380569 ADAMTS10Q9H324 1103 aa20.22■□□□□ 0.83
GCOM1-202ENST00000380569 DDX56Q9NY93 547 aaKnown RBP20.22■□□□□ 0.83
GCOM1-202ENST00000380569 WDR35Q9P2L0 1181 aa20.22■□□□□ 0.83
GCOM1-202ENST00000380569 NOVA2Q9UNW9 492 aaKnown RBP20.22■□□□□ 0.83
GCOM1-202ENST00000380569 ZNF236Q9UL36 1845 aa20.22■□□□□ 0.83
GCOM1-202ENST00000380569 PI4K2BG5E9Z4 385 aa20.21■□□□□ 0.83
GCOM1-202ENST00000380569 KRT3P12035 628 aa20.21■□□□□ 0.83
GCOM1-202ENST00000380569 PTPN7P35236 360 aa20.21■□□□□ 0.83
GCOM1-202ENST00000380569 RFC1P35251 1148 aaPredicted RBP20.21■□□□□ 0.83
GCOM1-202ENST00000380569 MDH1P40925 334 aaKnown RBP20.21■□□□□ 0.83
GCOM1-202ENST00000380569 ORC1Q13415 861 aa20.21■□□□□ 0.83
GCOM1-202ENST00000380569 DCAF4L1Q3SXM0 396 aa20.21■□□□□ 0.83
GCOM1-202ENST00000380569 MFSD7Q6UXD7 560 aa20.21■□□□□ 0.83
GCOM1-202ENST00000380569 FAM124BQ9H5Z6 455 aaPredicted RBP20.21■□□□□ 0.83
GCOM1-202ENST00000380569 KLHL11Q9NVR0 708 aa20.21■□□□□ 0.83
GCOM1-202ENST00000380569 GOLGA8SH3BPF8 625 aa20.2■□□□□ 0.82
GCOM1-202ENST00000380569 MICAL2O94851 1124 aa20.2■□□□□ 0.82
GCOM1-202ENST00000380569 VDRP11473 427 aa20.2■□□□□ 0.82
GCOM1-202ENST00000380569 FGFR4P22455 802 aa20.2■□□□□ 0.82
GCOM1-202ENST00000380569 HPDP32754 393 aaPredicted RBP20.2■□□□□ 0.82
GCOM1-202ENST00000380569 PSMC1P62191 440 aaKnown RBP20.2■□□□□ 0.82
GCOM1-202ENST00000380569 GUCY1A3Q02108 690 aa20.2■□□□□ 0.82
GCOM1-202ENST00000380569 CAV1Q03135 178 aa20.2■□□□□ 0.82
GCOM1-202ENST00000380569 ZNF268Q14587 947 aaPredicted RBP20.2■□□□□ 0.82
GCOM1-202ENST00000380569 CNGA2Q16280 664 aa20.2■□□□□ 0.82
GCOM1-202ENST00000380569 KIZQ2M2Z5 673 aa20.2■□□□□ 0.82
GCOM1-202ENST00000380569 ZFYVE27Q5T4F4 411 aa20.2■□□□□ 0.82
GCOM1-202ENST00000380569 CST9Q5W186 159 aa20.2■□□□□ 0.82
GCOM1-202ENST00000380569 SPOCD1Q6ZMY3 1216 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms