RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 SMPD1P17405 629 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 GMPRP36959 345 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 CDH6P55285 790 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 NME3Q13232 169 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 WDTC1Q8N5D0 677 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 CABS1Q96KC9 395 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 SGIP1Q9BQI5 828 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 NIF3L1Q9GZT8 377 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 ERAP1Q9NZ08 941 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 GRHL1Q9NZI5 618 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 LMO2P25791 158 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 SNAPC2Q13487 334 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 TWF2Q6IBS0 349 aaKnown RBP16.47■□□□□ 0.23
BRF1-203ENST00000379937 SLFN12LQ6IEE8 588 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 FEZF2Q8TBJ5 459 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.47■□□□□ 0.23
BRF1-203ENST00000379937 NAP1L3Q99457 506 aaPredicted RBP16.47■□□□□ 0.23
BRF1-203ENST00000379937 ADPGKQ9BRR6 497 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 NTPCRQ9BSD7 190 aaKnown RBP16.47■□□□□ 0.23
BRF1-203ENST00000379937 PDLIM7Q9NR12 457 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 TMEM59LQ9UK28 342 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.47■□□□□ 0.23
BRF1-203ENST00000379937 TREHO43280 583 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 ABCG1P45844 678 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 CCDC89Q8N998 374 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 TMEM35BQ8NCS4 154 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 NPLOC4Q8TAT6 608 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 ACTL9Q8TC94 416 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 RBM15Q96T37 977 aaKnown RBP eCLIP16.47■□□□□ 0.236e-6■■■■□ 19.9
BRF1-203ENST00000379937 MRPL45Q9BRJ2 306 aaKnown RBP16.47■□□□□ 0.23
BRF1-203ENST00000379937 GINM1Q9NU53 330 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.47■□□□□ 0.23
BRF1-203ENST00000379937 PCDHA3Q9Y5H8 950 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
BRF1-203ENST00000379937 ERBB2P04626 1255 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 PDGFRAP16234 1089 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 MDH1P40925 334 aaKnown RBP16.46■□□□□ 0.23
BRF1-203ENST00000379937 OLIG2Q13516 323 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 GLE1Q53GS7 698 aaKnown RBP16.46■□□□□ 0.23
BRF1-203ENST00000379937 ALS2CLQ60I27 953 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 DUPD1Q68J44 220 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 SRLQ86TD4 932 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 NLRP14Q86W24 1093 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 CCDC125Q86Z20 511 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 ARHGEF2Q92974 986 aaKnown RBP16.46■□□□□ 0.23
BRF1-203ENST00000379937 ELOVL4Q9GZR5 314 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 WNT8AQ9H1J5 351 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 SMARCAD1Q9H4L7 1026 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 INTS9Q9NV88 658 aaKnown RBP16.46■□□□□ 0.23
BRF1-203ENST00000379937 MFHAS1Q9Y4C4 1052 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 SCAMP3O14828 347 aaKnown RBP16.46■□□□□ 0.23
BRF1-203ENST00000379937 GAS8O95995 478 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 HOXC6P09630 235 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 CETPP11597 493 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 GTF2A2P52657 109 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 BCAR1P56945 870 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 PDIA2Q13087 525 aaKnown RBP16.46■□□□□ 0.23
BRF1-203ENST00000379937 CUL1Q13616 776 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 MPZL3Q6UWV2 235 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 CXCL17Q6UXB2 119 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 TMC2Q8TDI7 906 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 RHOBTB2Q9BYZ6 727 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 OSBPL7Q9BZF2 842 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 TMBIM4Q9HC24 238 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 FAM114A2Q9NRY5 505 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 SIX4Q9UIU6 781 aa16.46■□□□□ 0.23
BRF1-203ENST00000379937 TCRBV7S3A2A0A539 114 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 A8MXQ7 604 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 AARSP49588 968 aaKnown RBP eCLIP16.45■□□□□ 0.22
BRF1-203ENST00000379937 ZNF157P51786 506 aaPredicted RBP16.45■□□□□ 0.22
BRF1-203ENST00000379937 PGGT1BP53609 377 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 OTUD4Q01804 1114 aaKnown RBP16.45■□□□□ 0.22
BRF1-203ENST00000379937 SLC10A6Q3KNW5 377 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 CASC4Q6P4E1 433 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 MICALCLQ6ZW33 695 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 FAM131BQ86XD5 332 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 DNERQ8NFT8 737 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 ZMAT2Q96NC0 199 aaKnown RBP16.45■□□□□ 0.22
BRF1-203ENST00000379937 SPEGQ15772 3267 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 A0A0G2JLL6 359 aaPredicted RBP16.45■□□□□ 0.22
BRF1-203ENST00000379937 PECAM1P16284 738 aaPredicted RBP16.45■□□□□ 0.22
BRF1-203ENST00000379937 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 IER5Q5VY09 327 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 NUGGCQ68CJ6 796 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 PRRT2Q7Z6L0 340 aaPredicted RBP16.45■□□□□ 0.22
BRF1-203ENST00000379937 RHOT1Q8IXI2 618 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 ZNF473Q8WTR7 871 aaKnown RBP16.45■□□□□ 0.22
BRF1-203ENST00000379937 TMEM40Q8WWA1 233 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 RSAD2Q8WXG1 361 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 CFAP36Q96G28 342 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 PTPN18Q99952 460 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 SENP7Q9BQF6 1050 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 IFT122Q9HBG6 1241 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 CHMP2BQ9UQN3 213 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 MAD1L1Q9Y6D9 718 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 GRIN2DO15399 1336 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 CREB3O43889 395 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 PPFIA4O75335 1185 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 CYP2C9P11712 490 aa16.45■□□□□ 0.22
BRF1-203ENST00000379937 PTGIRP43119 386 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms