RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 RBM41Q96IZ5 413 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 TSPYL1Q9H0U9 437 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 WDR35Q9P2L0 1181 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 PRDM4Q9UKN5 801 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 ITGA11Q9UKX5 1188 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 C2CD2Q9Y426 696 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 LAMA3Q16787 3333 aa11.1□□□□□ -0.63
POLR2J3-201ENST00000379340 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 TCRBV5S1A1TA0A578 114 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 ERICH4A6NGS2 130 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 LACTBL1A8MY62 500 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 GAS8O95995 478 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 KRT14P02533 472 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 CFHP08603 1231 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 IQCF3P0C7M6 154 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 ZNF286BP0CG31 522 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 SMPD1P17405 629 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 ARF4P18085 180 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 BRD2P25440 801 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 PTPN7P35236 360 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 COPS2P61201 443 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 OSTNP61366 133 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 CAV1Q03135 178 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 PIGHQ14442 188 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 ARHGEF6Q15052 776 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 GJC2Q5T442 439 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 JADE1Q6IE81 842 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 ZDHHC24Q6UX98 284 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 ERICH1Q86X53 443 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 CPNE8Q86YQ8 564 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 RCOR2Q8IZ40 523 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 ZDHHC14Q8IZN3 488 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 NIPA2Q8N8Q9 360 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 CEP120Q8N960 986 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 C1orf127Q8N9H9 656 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 NLRP7Q8WX94 980 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 CAPS2Q9BXY5 557 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 TRIM31Q9BZY9 425 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 ZMYND15Q9H091 742 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 DDX56Q9NY93 547 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 GRHL1Q9NZI5 618 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 WHRNQ9P202 907 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 CPA4Q9UI42 421 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 DERAQ9Y315 318 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 SNX24Q9Y343 169 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 NFS1Q9Y697 457 aa11.09□□□□□ -0.63
POLR2J3-201ENST00000379340 A0A1B0GUA9 196 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 TSPAN1O60635 241 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 VTNP04004 478 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 NFICP08651 508 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 KRT19P08727 400 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 NUDT17P0C025 328 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 WEE2P0C1S8 567 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 GRM5P41594 1212 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 RPL21P46778 160 aaKnown RBP11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 GJA8P48165 433 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 PLTPP55058 493 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 LMNB2Q03252 620 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 CALCOCO2Q13137 446 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 KLF1Q13351 362 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 PTK6Q13882 451 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 TMEM132DQ14C87 1099 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 PPP1R7Q15435 360 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 CCNG2Q16589 344 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 PPP1R15BQ5SWA1 713 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 DCUN1D2Q6PH85 259 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 C17orf99Q6UX52 265 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 SCARA5Q6ZMJ2 495 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 Q7L0L9 218 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 HOOK3Q86VS8 718 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 CCDC50Q8IVM0 306 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 BBOF1Q8ND07 529 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 ATL2Q8NHH9 583 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 FNIP1Q8TF40 1166 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 ART4Q93070 314 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 SCLT1Q96NL6 688 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 ACAP3Q96P50 834 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 TRIM7Q9C029 511 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 DCLK3Q9C098 648 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 MIS12Q9H081 205 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 PLEKHA5Q9HAU0 1116 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 SRRDQ9UH36 339 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 SIX4Q9UIU6 781 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 ZHX1Q9UKY1 873 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 KIAA1257Q9ULG3 409 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 CITO14578 2027 aa11.08□□□□□ -0.64
POLR2J3-201ENST00000379340 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 TCRBV7S2A1N4TA0A589 114 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 SRRM3A6NNA2 597 aaPredicted RBP11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 NDC80O14777 642 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 ITGB3P05106 788 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 ITIH2P19823 946 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 NR1D1P20393 614 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 FLT3P36888 993 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 PSMC4P43686 418 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 PMS2P54278 862 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 TAS2R40P59535 323 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 RBP5P82980 135 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 ZNF844Q08AG5 666 aa11.07□□□□□ -0.64
POLR2J3-201ENST00000379340 STILQ15468 1287 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms