RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 LTBP3Q9NS15 1303 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 SOWAHBA6NEL2 793 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 RASA4BC9J798 803 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 RASA4O43374 803 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 NCKAP1LP55160 1127 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 FBXO47Q5MNV8 452 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 CEP120Q8N960 986 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 GDAP1Q8TB36 358 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 SPATA18Q8TC71 538 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 ATG4AQ8WYN0 398 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 TEPSINQ96N21 525 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 MTG1Q9BT17 334 aaPredicted RBP14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 CYP3A43Q9HB55 503 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 SMYD2Q9NRG4 433 aa14.91□□□□□ -0.02
SHROOM1-203ENST00000378679 CALCAP01258 141 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 FAM200BP0CF97 657 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 EIF4BP23588 611 aaKnown RBP14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 EEF1DP3Q658K8 133 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 CCT6BQ92526 530 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 CYB561D2O14569 222 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 KPNA6O60684 536 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 PGK1P00558 417 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 THP07101 528 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 GHRP10912 638 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 ZFXP17010 805 aaPredicted RBP14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 ACO1P21399 889 aaKnown RBP14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 ACADSBP45954 432 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 SESN3P58005 492 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 P3H1Q32P28 736 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 ZCWPW2Q504Y3 356 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 CCDC62Q6P9F0 684 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 MCOLN2Q8IZK6 566 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 RYBPQ8N488 228 aaPredicted RBP14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 OR5B17Q8NGF7 314 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 ARHGEF26Q96DR7 871 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 ZNF518BQ9C0D4 1074 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 C4BP0C0L5 1744 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 KCNN4O15554 427 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 KRT10P13645 584 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 HIRAP54198 1017 aaPredicted RBP14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 DEUP1Q05D60 604 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 JADE1Q6IE81 842 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 KIRREL3Q8IZU9 778 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 PPP4R1Q8TF05 950 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.9□□□□□ -0.022e-7■■■■■ 58.1
SHROOM1-203ENST00000378679 BSNDQ8WZ55 320 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 GPR20Q99678 358 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 HES2Q9Y543 173 aa14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 MYH14Q7Z406 1995 aaKnown RBP14.9□□□□□ -0.02
SHROOM1-203ENST00000378679 PJA2O43164 708 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 B4GALT5O43286 388 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 PROSCO94903 275 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 APRTP07741 180 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 ATICP31939 592 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 HNRNPH3P31942 346 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 TNFSF9P41273 254 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 SPIRE1Q08AE8 756 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 C4orf50Q6ZRC1 276 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 ZNF410Q86VK4 478 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 CDKL3Q8IVW4 592 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 PPM1NQ8N819 430 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 TRAIPQ9BWF2 469 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 CDT1Q9H211 546 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 MLXIPLQ9NP71 852 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 RAB6BQ9NRW1 208 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 ZNF536O15090 1300 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 COILP38432 576 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 NDST1P52848 882 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 MARSP56192 900 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 SNCBQ16143 134 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 FAM110CQ1W6H9 321 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 ZACNQ401N2 412 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 NOL9Q5SY16 702 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 ARHGEF2Q92974 986 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 RBM15Q96T37 977 aaKnown RBP eCLIP14.89□□□□□ -0.037e-7■■■□□ 17.3
SHROOM1-203ENST00000378679 EPAS1Q99814 870 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 TAS2R14Q9NYV8 317 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.89□□□□□ -0.032e-17■□□□□ 8.7
SHROOM1-203ENST00000378679 BNIP3LO60238 219 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 KRT37O76014 449 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 SUN1O94901 812 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 ITIH2P19823 946 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 PTENP60484 403 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 HIF1AQ16665 826 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 BOLA3Q53S33 107 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 EFHC1Q5JVL4 640 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 TTC25Q96NG3 672 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 RSAD1Q9HA92 442 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 WRAP73Q9P2S5 460 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 RBPJLQ9UBG7 517 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 IPO11Q9UI26 975 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 A0A0G2JLL6 359 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 MAPK13O15264 365 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 TPI1P60174 286 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 IRX4P78413 519 aa14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 SMAD1Q15797 465 aaKnown RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 KCTD19Q17RG1 926 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 PRRT2Q7Z6L0 340 aaPredicted RBP14.89□□□□□ -0.03
SHROOM1-203ENST00000378679 TMEM139Q8IV31 216 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms