RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 CAND2O75155 1236 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 KLHL2O95198 593 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 TRADDQ15628 312 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 SLC15A2Q16348 729 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 SV2CQ496J9 727 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 DCAF6Q58WW2 860 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 TTC39BQ5VTQ0 682 aaPredicted RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 KCNK18Q7Z418 384 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 SLC47A2Q86VL8 602 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 IDI2Q9BXS1 227 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 MANSC1Q9H8J5 431 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 SARS2Q9NP81 518 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 SLC38A7Q9NVC3 462 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 FAM8A1Q9UBU6 413 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 NLRP11P59045 1033 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 USP10Q14694 798 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 CCNG2Q16589 344 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 GOLGA7BQ2TAP0 167 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 CAPRIN2Q6IMN6 1127 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 ANKRD13AQ8IZ07 590 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 PARD3BQ8TEW8 1205 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 ZNF526Q8TF50 670 aaPredicted RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 E2F7Q96AV8 911 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 STAMBPL1Q96FJ0 436 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 MTMR12Q9C0I1 747 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 YIPF3Q9GZM5 350 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 VPS33BQ9H267 617 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 EML4Q9HC35 981 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 SLC40A1Q9NP59 571 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 TRIM49D1C9J1S8 452 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 CPB1P15086 417 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 SPATA2LQ8IUW3 424 aaPredicted RBP11.79□□□□□ -0.52
RPGR-203ENST00000378505 ZKSCAN4Q969J2 545 aaPredicted RBP11.79□□□□□ -0.52
RPGR-203ENST00000378505 SLC4A9Q96Q91 983 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 CDC42EP4Q9H3Q1 356 aaKnown RBP11.79□□□□□ -0.52
RPGR-203ENST00000378505 BATF3Q9NR55 127 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 KCNQ5Q9NR82 932 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.79□□□□□ -0.524e-9■■■■□ 22.8
RPGR-203ENST00000378505 TJP2Q9UDY2 1190 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 E2F6O75461 281 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 ITGA4P13612 1032 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 GNL1P36915 607 aaPredicted RBP11.79□□□□□ -0.52
RPGR-203ENST00000378505 PNPLA4P41247 253 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 MMP14P50281 582 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 ANO4Q32M45 955 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 KIF2BQ8N4N8 673 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 GPRC5AQ8NFJ5 357 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
RPGR-203ENST00000378505 NCLNQ969V3 563 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 ACSF2Q96CM8 615 aaPredicted RBP11.79□□□□□ -0.52
RPGR-203ENST00000378505 RMDN1Q96DB5 314 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 MTBPQ96DY7 904 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 KCNK16Q96T55 309 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 PXMP2Q9NR77 195 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 INTS13Q9NVM9 706 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 SIK3Q9Y2K2 1263 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 B2RBV5 119 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 DDX3XO00571 662 aaKnown RBP eCLIP11.79□□□□□ -0.52
RPGR-203ENST00000378505 LSM8O95777 96 aaKnown RBP11.79□□□□□ -0.52
RPGR-203ENST00000378505 VDRP11473 427 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 NOTUMQ6P988 496 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 CREG2Q8IUH2 290 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 ATPAF2Q8N5M1 289 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 DTX3LQ8TDB6 740 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 PTPRN2Q92932 1015 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 VCAM1P19320 739 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 ARHGDIAP52565 204 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 TMEM62Q0P6H9 643 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 IMPG1Q17R60 797 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 MPZL3Q6UWV2 235 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 NIPA1Q7RTP0 329 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 ING2Q9H160 280 aa11.79□□□□□ -0.52
RPGR-203ENST00000378505 IGF2BP3O00425 579 aaKnown RBP eCLIP11.78□□□□□ -0.52
RPGR-203ENST00000378505 HOXA10P31260 410 aaPredicted RBP11.78□□□□□ -0.52
RPGR-203ENST00000378505 GRIK1P39086 918 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 AARSP49588 968 aaKnown RBP eCLIP11.78□□□□□ -0.52
RPGR-203ENST00000378505 COL9A3Q14050 684 aaPredicted RBP11.78□□□□□ -0.52
RPGR-203ENST00000378505 CLEC16AQ2KHT3 1053 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 RNF219Q5W0B1 726 aaPredicted RBP11.78□□□□□ -0.52
RPGR-203ENST00000378505 APOBEC3HQ6NTF7 200 aaKnown RBP11.78□□□□□ -0.52
RPGR-203ENST00000378505 CD302Q8IX05 232 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 CATSPER1Q8NEC5 780 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 HDAC7Q8WUI4 952 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 SLC5A5Q92911 643 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 TSPAN17Q96FV3 270 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 PPP1R2P1Q96PQ5 205 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 ABCF3Q9NUQ8 709 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 MRGBPQ9NV56 204 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 NSMCE4AQ9NXX6 385 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 UBQLN1Q9UMX0 589 aaKnown RBP11.78□□□□□ -0.52
RPGR-203ENST00000378505 FRMPD4Q14CM0 1322 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 VIL1P09327 827 aaKnown RBP11.78□□□□□ -0.52
RPGR-203ENST00000378505 C6orf222P0C671 652 aaPredicted RBP11.78□□□□□ -0.52
RPGR-203ENST00000378505 GFAPP14136 432 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 VEGFAP15692 232 aaPredicted RBP11.78□□□□□ -0.52
RPGR-203ENST00000378505 PDCD2Q16342 344 aaPredicted RBP11.78□□□□□ -0.52
RPGR-203ENST00000378505 DNAAF5Q86Y56 855 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 ARHGAP18Q8N392 663 aa11.78□□□□□ -0.52
RPGR-203ENST00000378505 SPIRE2Q8WWL2 714 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms