RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 LRRC4Q9HBW1 653 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 GTSE1Q9NYZ3 720 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 BFARQ9NZS9 450 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 BCS1LQ9Y276 419 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 ARFGEF2Q9Y6D5 1785 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 CYP3A7-CYP3A51PA0A087WV96 503 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 M0QZ92 97 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 CST8O60676 142 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 CYP3A7P24462 503 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 OVGP1Q12889 678 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 CCDC92Q53HC0 331 aaPredicted RBP9.17□□□□□ -0.94
PCDH9-202ENST00000377865 XKR3Q5GH77 459 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 TRIM67Q6ZTA4 783 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 LCA5Q86VQ0 697 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 MCOLN2Q8IZK6 566 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 TLCD1Q96CP7 247 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 APOPT1Q96IL0 206 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 FAM118BQ9BPY3 351 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 EIF2AQ9BY44 585 aaKnown RBP9.17□□□□□ -0.94
PCDH9-202ENST00000377865 KCTD10Q9H3F6 313 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 TBC1D23Q9NUY8 699 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 MAP3K20Q9NYL2 800 aaKnown RBP9.17□□□□□ -0.94
PCDH9-202ENST00000377865 DCDC2Q9UHG0 476 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 ARHGAP26Q9UNA1 814 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 TRIM49D1C9J1S8 452 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 MGRN1O60291 552 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 ESRRBO95718 433 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 SRGAP2CP0DJJ0 459 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 ATP6V1C1P21283 382 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 IL10P22301 178 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 C1QBPQ07021 282 aaKnown RBP9.17□□□□□ -0.94
PCDH9-202ENST00000377865 ITKQ08881 620 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 ITPK1Q13572 414 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 EFHC1Q5JVL4 640 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 IZUMO2Q6UXV1 221 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 SLC47A2Q86VL8 602 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 NCAPG2Q86XI2 1143 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 TERB1Q8NA31 727 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 PRCCQ92733 491 aaPredicted RBP9.17□□□□□ -0.94
PCDH9-202ENST00000377865 KAT2BQ92831 832 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 HIC2Q96JB3 615 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 XAB2Q9HCS7 855 aaKnown RBP9.17□□□□□ -0.94
PCDH9-202ENST00000377865 CDYLQ9Y232 598 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 FIS1Q9Y3D6 152 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 GJA3Q9Y6H8 435 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 RASSF9O75901 435 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 APOA4P06727 396 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 RFC5P40937 340 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 PHKA2P46019 1235 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 VCPP55072 806 aaKnown RBP9.17□□□□□ -0.94
PCDH9-202ENST00000377865 NFIL3Q16649 462 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 GSTA3Q16772 222 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
PCDH9-202ENST00000377865 CLEC10AQ8IUN9 316 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 TTC16Q8NEE8 873 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 KCNMB3Q9NPA1 279 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 LRRC4BQ9NT99 713 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 BCL9O00512 1426 aa9.17□□□□□ -0.94
PCDH9-202ENST00000377865 ADCY3O60266 1144 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 PSMG1O95456 288 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 EPHB2P29323 1055 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 CIITAP33076 1130 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 KCNQ4P56696 695 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 OCRLQ01968 901 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 ACVR2BQ13705 512 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 NFIXQ14938 502 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 KCNK18Q7Z418 384 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 CCNJLQ8IV13 435 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 ARID3BQ8IVW6 561 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 ARHGEF19Q8IW93 802 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 KATNAL2Q8IYT4 538 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 SPATA18Q8TC71 538 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 PSPC1Q8WXF1 523 aaKnown RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 ZNF75CPQ92670 426 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 OXNAD1Q96HP4 312 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 NUDT12Q9BQG2 462 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 JPH1Q9HDC5 661 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 WNT7AO00755 349 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 PSMD7P51665 324 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 OSTNP61366 133 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 SLC26A11Q86WA9 606 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 TTC8Q8TAM2 541 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 NIF3L1Q9GZT8 377 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 IVNS1ABPQ9Y6Y0 642 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 DDX3YO15523 660 aaKnown RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 MAFGO15525 162 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 KCNJ2P63252 427 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 ARHGAP22Q7Z5H3 698 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 NET1Q7Z628 596 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 KLF6Q99612 283 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 MRPL1Q9BYD6 325 aaKnown RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 TDRD3Q9H7E2 651 aaKnown RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 RNF146Q9NTX7 359 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 CHORDC1Q9UHD1 332 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 ASTN1O14525 1302 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 WDR46O15213 610 aaKnown RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 IL18RAPO95256 599 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 GPD1P21695 349 aa9.16□□□□□ -0.94
PCDH9-202ENST00000377865 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-202ENST00000377865 FDFT1P37268 417 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms