RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 YY1P25490 414 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 COG7P83436 770 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 NOL9Q5SY16 702 aaKnown RBP15.24■□□□□ 0.03
TCOF1-202ENST00000377797 SYCP2LQ5T4T6 812 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 JADE1Q6IE81 842 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 HPCAL4Q9UM19 191 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 TPI1P60174 286 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 SH2D3CQ8N5H7 860 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 PPM1NQ8N819 430 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 ATP11CQ8NB49 1132 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.24■□□□□ 0.03
TCOF1-202ENST00000377797 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.24■□□□□ 0.03
TCOF1-202ENST00000377797 ITGA11Q9UKX5 1188 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 CYB561D2O14569 222 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 THP07101 528 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 SPIRE1Q08AE8 756 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 MAP2K5Q13163 448 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 THOC5Q13769 683 aaKnown RBP15.24■□□□□ 0.03
TCOF1-202ENST00000377797 BOLA3Q53S33 107 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 BEND6Q5SZJ8 279 aaPredicted RBP15.24■□□□□ 0.03
TCOF1-202ENST00000377797 NUGGCQ68CJ6 796 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 EP400NLQ6ZTU2 488 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 KIAA0319LQ8IZA0 1049 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 OR2W6PQ8NHA6 318 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 GPR20Q99678 358 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 RAB6BQ9NRW1 208 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 MYH13Q9UKX3 1938 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 KRT10P13645 584 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 BRAFP15056 766 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
TCOF1-202ENST00000377797 ZACNQ401N2 412 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 RGMBQ6NW40 437 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 C12orf56Q8IXR9 622 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 BSNDQ8WZ55 320 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 MLXIPLQ9NP71 852 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 TAS2R14Q9NYV8 317 aa15.24■□□□□ 0.03
TCOF1-202ENST00000377797 SOWAHBA6NEL2 793 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 PSTPIP1O43586 416 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 APOEP02649 317 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 APRTP07741 180 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 NDST1P52848 882 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 PPP2R2AP63151 447 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 RYBPQ8N488 228 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-202ENST00000377797 UPF1Q92900 1129 aaKnown RBP eCLIP15.23■□□□□ 0.03
TCOF1-202ENST00000377797 PLEKHA5Q9HAU0 1116 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 ZNF536O15090 1300 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 TNFSF9P41273 254 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 C11orf63Q6NUN7 778 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 IRF2BP2Q7Z5L9 587 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 OR5B17Q8NGF7 314 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 SHC3Q92529 594 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 CDT1Q9H211 546 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 XPNPEP3Q9NQH7 507 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.23■□□□□ 0.03
TCOF1-202ENST00000377797 TLK1Q9UKI8 766 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 TNFSF13BQ9Y275 285 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 CALCAP01258 141 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 ACO1P21399 889 aaKnown RBP15.23■□□□□ 0.03
TCOF1-202ENST00000377797 FNTAP49354 379 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 LIG3P49916 1009 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 EEF1DP3Q658K8 133 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 SLC7A14Q8TBB6 771 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 CASKIN2Q8WXE0 1202 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 PPM1EQ8WY54 764 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 TEPSINQ96N21 525 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 PRDM5Q9NQX1 630 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-202ENST00000377797 BARX2Q9UMQ3 279 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-202ENST00000377797 NRCAMQ92823 1304 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 UBR2Q8IWV8 1755 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 PFDN6O15212 129 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 EIF4BP23588 611 aaKnown RBP15.23■□□□□ 0.03
TCOF1-202ENST00000377797 PTENP60484 403 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 CENPCQ03188 943 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 KLHL38Q2WGJ6 581 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 CCDC38Q502W7 563 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 CHADLQ6NUI6 762 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 CXCL17Q6UXB2 119 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 ANKMY2Q8IV38 441 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 ACO2Q99798 780 aaKnown RBP15.23■□□□□ 0.03
TCOF1-202ENST00000377797 PCDHGC5Q9Y5F6 944 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 CAPN7Q9Y6W3 813 aa15.23■□□□□ 0.03
TCOF1-202ENST00000377797 A0A0G2JLL6 359 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-202ENST00000377797 MTM1Q13496 603 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 TDRD10Q5VZ19 366 aaKnown RBP15.22■□□□□ 0.03
TCOF1-202ENST00000377797 PRRT2Q7Z6L0 340 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-202ENST00000377797 NT5DC3Q86UY8 548 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 ADGRF2Q8IZF7 708 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 BCAS3Q9H6U6 928 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 RNF19AQ9NV58 838 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 BFARQ9NZS9 450 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 L1RE1Q9UN81 338 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 REXO2Q9Y3B8 237 aaKnown RBP15.22■□□□□ 0.03
TCOF1-202ENST00000377797 IRS2Q9Y4H2 1338 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 PPP1R12AO14974 1030 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-202ENST00000377797 ZBTB22O15209 634 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 B4GALT5O43286 388 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 SERPINB6P35237 376 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 IRX4P78413 519 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 FAM110CQ1W6H9 321 aa15.22■□□□□ 0.03
TCOF1-202ENST00000377797 FAM117BQ6P1L5 589 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms