RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 VCPP55072 806 aaKnown RBP26.69■■□□□ 1.86
C9orf40-201ENST00000376854 IRX3P78415 501 aaPredicted RBP26.69■■□□□ 1.86
C9orf40-201ENST00000376854 ZNF394Q53GI3 561 aa26.69■■□□□ 1.86
C9orf40-201ENST00000376854 KIF2BQ8N4N8 673 aa26.69■■□□□ 1.86
C9orf40-201ENST00000376854 TMEM35BQ8NCS4 154 aa26.69■■□□□ 1.86
C9orf40-201ENST00000376854 NIFKQ9BYG3 293 aaKnown RBP26.69■■□□□ 1.86
C9orf40-201ENST00000376854 HGSO14964 777 aaPredicted RBP26.68■■□□□ 1.86
C9orf40-201ENST00000376854 ATP2A1O14983 1001 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 ASMTLO95671 621 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 TNFSF9P41273 254 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 ACVR2BQ13705 512 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 CAPSQ13938 189 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 OASLQ15646 514 aaKnown RBP26.68■■□□□ 1.86
C9orf40-201ENST00000376854 STXBP2Q15833 593 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 CATSPERGQ6ZRH7 1159 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 CAPN12Q6ZSI9 719 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 ECHDC2Q86YB7 292 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 BRSK2Q8IWQ3 736 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 TRPM4Q8TD43 1214 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 TRABDQ9H4I3 376 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 LRRD1A4D1F6 860 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 PTPN7P35236 360 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 PRKG1Q13976 671 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 PIGHQ14442 188 aaPredicted RBP26.68■■□□□ 1.86
C9orf40-201ENST00000376854 RNASEH2BQ5TBB1 312 aaKnown RBP26.68■■□□□ 1.86
C9orf40-201ENST00000376854 ZBED8Q8IZ13 594 aa26.68■■□□□ 1.86
C9orf40-201ENST00000376854 TTLL13PA6NNM8 815 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 ADCY3O60266 1144 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 KRT15P19012 456 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 MYL6P60660 151 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 PLCB3Q01970 1234 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 PKN2Q16513 984 aaKnown RBP26.67■■□□□ 1.86
C9orf40-201ENST00000376854 WDR72Q3MJ13 1102 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 WDR49Q8IV35 697 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 TMEM121Q9BTD3 319 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 MTMR12Q9C0I1 747 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 ARHGEF3Q9NR81 526 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 DDX56Q9NY93 547 aaKnown RBP26.67■■□□□ 1.86
C9orf40-201ENST00000376854 BRCA1P38398 1863 aaKnown RBP26.67■■□□□ 1.86
C9orf40-201ENST00000376854 MYH9P35579 1960 aaKnown RBP26.67■■□□□ 1.86
C9orf40-201ENST00000376854 FZD9O00144 591 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 PRPF4O43172 522 aaKnown RBP eCLIP26.67■■□□□ 1.86
C9orf40-201ENST00000376854 CDKN2BP42772 138 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 AP3M2P53677 418 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 CCDC142Q17RM4 750 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 GPAT2Q6NUI2 795 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 ZBTB33Q86T24 672 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 DENND1AQ8TEH3 1009 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 NKD2Q969F2 451 aaPredicted RBP26.67■■□□□ 1.86
C9orf40-201ENST00000376854 KIF9Q9HAQ2 790 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 CISHQ9NSE2 258 aa26.67■■□□□ 1.86
C9orf40-201ENST00000376854 SGK1O00141 431 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 ALOX15BO15296 676 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 IFNB1P01574 187 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 ITGAVP06756 1048 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 KRT16P08779 473 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 ICAM3P32942 547 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 RFC5P40937 340 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 CENPUQ71F23 418 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 ASRGL1Q7L266 308 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 SMC6Q96SB8 1091 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 SHOC2Q9UQ13 582 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 SPDYE16A6NNV3 312 aaPredicted RBP26.66■■□□□ 1.86
C9orf40-201ENST00000376854 TAP1Q03518 808 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 SPARCL1Q14515 664 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 PPP1R15BQ5SWA1 713 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 TCHPQ9BT92 498 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 PCDH9Q9HC56 1237 aa26.66■■□□□ 1.86
C9orf40-201ENST00000376854 SMG5Q9UPR3 1016 aaKnown RBP26.66■■□□□ 1.86
C9orf40-201ENST00000376854 MAGEB2O15479 319 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 ALADP13716 330 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 CNTN2Q02246 1040 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 CCDC15Q0P6D6 951 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 PDIA2Q13087 525 aaKnown RBP26.65■■□□□ 1.86
C9orf40-201ENST00000376854 DNAJC3Q13217 504 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 CYP4A22Q5TCH4 519 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 ERICH1Q86X53 443 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 WDTC1Q8N5D0 677 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 ANKLE1Q8NAG6 615 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 KLRG1Q96E93 195 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 ZNF518BQ9C0D4 1074 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 NIF3L1Q9GZT8 377 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 TRIM33Q9UPN9 1127 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 STARD13Q9Y3M8 1113 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 ZPBP2Q6X784 338 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 C4orf33Q8N1A6 199 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 MRRFQ96E11 262 aaKnown RBP26.65■■□□□ 1.86
C9orf40-201ENST00000376854 CXorf56Q9H5V9 222 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 SENP1Q9P0U3 644 aa26.65■■□□□ 1.86
C9orf40-201ENST00000376854 SIP14410 1827 aa26.64■■□□□ 1.86
C9orf40-201ENST00000376854 IGKV6D-21A0A0A0MT36 114 aa26.64■■□□□ 1.86
C9orf40-201ENST00000376854 A0A1B0GUA9 196 aa26.64■■□□□ 1.86
C9orf40-201ENST00000376854 C19orf81C9J6K1 198 aa26.64■■□□□ 1.86
C9orf40-201ENST00000376854 SLC18A1P54219 525 aa26.64■■□□□ 1.86
C9orf40-201ENST00000376854 NIPA2Q8N8Q9 360 aa26.64■■□□□ 1.86
C9orf40-201ENST00000376854 AGAP11Q8TF27 550 aa26.64■■□□□ 1.86
C9orf40-201ENST00000376854 SPOCK2Q92563 424 aa26.64■■□□□ 1.86
C9orf40-201ENST00000376854 PRCCQ92733 491 aaPredicted RBP26.64■■□□□ 1.86
C9orf40-201ENST00000376854 PHTF1Q9UMS5 762 aa26.64■■□□□ 1.86
C9orf40-201ENST00000376854 STK38LQ9Y2H1 464 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms