RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 TCF4P15884 667 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 PPP2R2AP63151 447 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 ATP13A4Q4VNC1 1196 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 DENND1BQ6P3S1 775 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 MTHFD1LQ6UB35 978 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 RCOR2Q8IZ40 523 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 MAML3Q96JK9 1138 aa21.39■■□□□ 1.01
VSX1-202ENST00000376709 NDUFAB1O14561 156 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 RIPK2O43353 540 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 CAND2O75155 1236 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 KRT1P04264 644 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 ATF7P17544 494 aaPredicted RBP21.38■■□□□ 1.01
VSX1-202ENST00000376709 POLR2BP30876 1174 aaKnown RBP21.38■■□□□ 1.01
VSX1-202ENST00000376709 ADCY8P40145 1251 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 PIGHQ14442 188 aaPredicted RBP21.38■■□□□ 1.01
VSX1-202ENST00000376709 KAZNQ674X7 775 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 ZNF365Q70YC5 407 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 PLEKHH3Q7Z736 793 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 TMEM130Q8N3G9 435 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 ASB7Q9H672 318 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 KAT6AQ92794 2004 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 TLDC2A0PJX2 215 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 SMIM23A6NLE4 172 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 MYO1CO00159 1063 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 VPS41P49754 854 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 OGDHQ02218 1023 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 PPARDQ03181 441 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 ORC1Q13415 861 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 FAM110CQ1W6H9 321 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 SMYD5Q6GMV2 418 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 ANKS1BQ7Z6G8 1248 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 UHMK1Q8TAS1 419 aaKnown RBP21.38■■□□□ 1.01
VSX1-202ENST00000376709 EPN3Q9H201 632 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 SMYD3Q9H7B4 428 aa21.38■■□□□ 1.01
VSX1-202ENST00000376709 GOLGA8SH3BPF8 625 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 MEFVO15553 781 aaPredicted RBP21.37■■□□□ 1.01
VSX1-202ENST00000376709 PAEPP09466 180 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 RAD23BP54727 409 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 KYAT1Q16773 422 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 PPP1R15BQ5SWA1 713 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 LRRC38Q5VT99 294 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 SLITRK1Q96PX8 696 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 LHX5Q9H2C1 402 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 SYNCQ9H7C4 482 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 SLC12A6Q9UHW9 1150 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 TP73O15350 636 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 KRT10P13645 584 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 P4HA1P13674 534 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 SMPD1P17405 629 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 TMEM132DQ14C87 1099 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 GRIK4Q16099 956 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 PTGISQ16647 500 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 SLC10A6Q3KNW5 377 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 PTPN20Q4JDL3 420 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 CST9Q5W186 159 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 GSTA5Q7RTV2 222 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 NPLOC4Q8TAT6 608 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 FAXDC2Q96IV6 333 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 SDCBP2Q9H190 292 aa21.37■■□□□ 1.01
VSX1-202ENST00000376709 ANKRD65E5RJM6 399 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 EBAG9O00559 213 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 TJP3O95049 919 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 ATICP31939 592 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 ITGA8P53708 1063 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 CAV1Q03135 178 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 ADCY2Q08462 1091 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 BYSLQ13895 437 aaKnown RBP21.36■■□□□ 1.01
VSX1-202ENST00000376709 UBAP2Q5T6F2 1119 aaKnown RBP21.36■■□□□ 1.01
VSX1-202ENST00000376709 TRMT10CQ7L0Y3 403 aaKnown RBP21.36■■□□□ 1.01
VSX1-202ENST00000376709 CROCCP2Q86T23 111 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 CCDC89Q8N998 374 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 TLCD1Q96CP7 247 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 ADPGKQ9BRR6 497 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 TINF2Q9BSI4 451 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 TRAIPQ9BWF2 469 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 CPA4Q9UI42 421 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 KRT3P12035 628 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 IVDP26440 423 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 MFSD7Q6UXD7 560 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 PGM2Q96G03 612 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 HPDLQ96IR7 371 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 TSPYL1Q9H0U9 437 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 HMGXB4Q9UGU5 601 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 ANAPC5Q9UJX4 755 aa21.36■■□□□ 1.01
VSX1-202ENST00000376709 TRIM66O15016 1216 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 RGS16O15492 202 aaPredicted RBP21.35■■□□□ 1.01
VSX1-202ENST00000376709 TSPAN1O60635 241 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 CDR1P51861 262 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 PSMC1P62191 440 aaKnown RBP21.35■■□□□ 1.01
VSX1-202ENST00000376709 PTPN11Q06124 597 aaPredicted RBP21.35■■□□□ 1.01
VSX1-202ENST00000376709 ACVR2BQ13705 512 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 DUSP28Q4G0W2 176 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 RHBDF2Q6PJF5 856 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 NIPA2Q8N8Q9 360 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 SLC4A11Q8NBS3 891 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 OR6J1Q8NGC5 347 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 ACAP3Q96P50 834 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 TWNKQ96RR1 684 aa21.35■■□□□ 1.01
VSX1-202ENST00000376709 CDC42EP4Q9H3Q1 356 aaKnown RBP21.35■■□□□ 1.01
VSX1-202ENST00000376709 CYTH4Q9UIA0 394 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms