RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 LDHAP00338 332 aaKnown RBP19.93■□□□□ 0.78
HDAC6-202ENST00000376610 WEE1P30291 646 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 SOX9P48436 509 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 CYP4F8P98187 520 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 TFAMQ00059 246 aaKnown RBP19.93■□□□□ 0.78
HDAC6-202ENST00000376610 PTPAQ15257 358 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 RSPO4Q2I0M5 234 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-202ENST00000376610 L1TD1Q5T7N2 865 aaKnown RBP19.93■□□□□ 0.78
HDAC6-202ENST00000376610 CCDC73Q6ZRK6 1079 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 USP49Q70CQ1 688 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 EFCAB13Q8IY85 973 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 SYCP3Q8IZU3 236 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 BPIFB1Q8TDL5 484 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 CACTINQ8WUQ7 758 aaKnown RBP19.93■□□□□ 0.78
HDAC6-202ENST00000376610 FAM213AQ9BRX8 229 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 TBC1D7Q9P0N9 293 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 FBXO2Q9UK22 296 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-202ENST00000376610 USP18Q9UMW8 372 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 PCDHB5Q9Y5E4 795 aa19.93■□□□□ 0.78
HDAC6-202ENST00000376610 MYBPHLA2RUH7 354 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 PRR5-ARHGAP8B1AHC4 643 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 IDEP14735 1019 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 ATF6P18850 670 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 ADSSP30520 456 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 ARHGAP8P85298 464 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 LMNB2Q03252 620 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 CUL4AQ13619 759 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 ALCAMQ13740 583 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 CRELD2Q6UXH1 353 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-202ENST00000376610 CELF5Q8N6W0 485 aaKnown RBP19.92■□□□□ 0.78
HDAC6-202ENST00000376610 TTC8Q8TAM2 541 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 GIPC2Q8TF65 315 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 MKNK1Q9BUB5 465 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 DLL3Q9NYJ7 618 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 GTSE1Q9NYZ3 720 aa19.92■□□□□ 0.78
HDAC6-202ENST00000376610 ZNF638Q14966 1978 aaKnown RBP19.92■□□□□ 0.78
HDAC6-202ENST00000376610 MYMKA6NI61 221 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 HUS1O60921 280 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 PPP1R37O75864 691 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 HAPLN1P10915 354 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-202ENST00000376610 TDGF1P13385 188 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 CTHP32929 405 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 AVPR1AP37288 418 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 STAT6P42226 847 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 CDR1P51861 262 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 SATB1Q01826 763 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 CEBPZQ03701 1054 aaKnown RBP19.91■□□□□ 0.78
HDAC6-202ENST00000376610 NFE2Q16621 373 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-202ENST00000376610 PRR23BQ6ZRT6 265 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 BRSK2Q8IWQ3 736 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 ZFYVE19Q96K21 471 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 CLIC6Q96NY7 704 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 OLFML3Q9NRN5 406 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 RBAKQ9NYW8 714 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-202ENST00000376610 R3HCC1Q9Y3T6 440 aaKnown RBP19.91■□□□□ 0.78
HDAC6-202ENST00000376610 NCOR2Q9Y618 2525 aa19.91■□□□□ 0.78
HDAC6-202ENST00000376610 PRAMEF12O95522 483 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 ITGB3P05106 788 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 GARTP22102 1010 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 DDX6P26196 483 aaKnown RBP eCLIP19.9■□□□□ 0.78
HDAC6-202ENST00000376610 POLR2BP30876 1174 aaKnown RBP19.9■□□□□ 0.78
HDAC6-202ENST00000376610 MYL7Q01449 175 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 BFSP1Q12934 665 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 ITPRIPL2Q3MIP1 535 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 LAIR1Q6GTX8 287 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 LRRTM3Q86VH5 581 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 TMEM86AQ8N2M4 240 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 SYNPOQ8N3V7 929 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 NOC3LQ8WTT2 800 aaKnown RBP19.9■□□□□ 0.78
HDAC6-202ENST00000376610 DNAJC19Q96DA6 116 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 SAAL1Q96ER3 474 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 STRA6Q9BX79 667 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 IKZF4Q9H2S9 585 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 IL21Q9HBE4 155 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 RBM12Q9NTZ6 932 aaKnown RBP19.9■□□□□ 0.78
HDAC6-202ENST00000376610 CDV3Q9UKY7 258 aaKnown RBP19.9■□□□□ 0.78
HDAC6-202ENST00000376610 AGAP1Q9UPQ3 857 aa19.9■□□□□ 0.78
HDAC6-202ENST00000376610 PRPF40AO75400 957 aaKnown RBP19.89■□□□□ 0.77
HDAC6-202ENST00000376610 CNR2P34972 360 aa19.89■□□□□ 0.77
HDAC6-202ENST00000376610 KCNA1Q09470 495 aa19.89■□□□□ 0.77
HDAC6-202ENST00000376610 SIM2Q14190 667 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-202ENST00000376610 PON2Q15165 354 aa19.89■□□□□ 0.77
HDAC6-202ENST00000376610 CMTM8Q8IZV2 173 aa19.89■□□□□ 0.77
HDAC6-202ENST00000376610 MRPS31Q92665 395 aaKnown RBP19.89■□□□□ 0.77
HDAC6-202ENST00000376610 LRRC3BQ96PB8 259 aa19.89■□□□□ 0.77
HDAC6-202ENST00000376610 TMEM206Q9H813 350 aa19.89■□□□□ 0.77
HDAC6-202ENST00000376610 ITGA11Q9UKX5 1188 aa19.89■□□□□ 0.77
HDAC6-202ENST00000376610 SPTBN2O15020 2390 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 DENND4CQ5VZ89 1909 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 PAPSS2O95340 614 aaPredicted RBP19.88■□□□□ 0.77
HDAC6-202ENST00000376610 KRT19P08727 400 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 CSH1P0DML2 217 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 CSH2P0DML3 217 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 SYT1P21579 422 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 RPL10AP62906 217 aaKnown RBP19.88■□□□□ 0.77
HDAC6-202ENST00000376610 AMPD2Q01433 879 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 RESTQ13127 1097 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 GAS6Q14393 721 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 LPAL2Q16609 132 aa19.88■□□□□ 0.77
HDAC6-202ENST00000376610 CC2D1AQ6P1N0 951 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms