RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 DNALI1O14645 258 aaPredicted RBP12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 MTHFD1LQ6UB35 978 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 HAUS6Q7Z4H7 955 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 SCYL3Q8IZE3 742 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 TCP10LQ8TDR4 215 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 KCNK13Q9HB14 408 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 LMCD1Q9NZU5 365 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 GYG2O15488 501 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 ZCCHC18P0CG32 403 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 MAGEA8P43361 318 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 PEX3P56589 373 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 SLC34A1Q06495 639 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 TRAF1Q13077 416 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 PDIA2Q13087 525 aaKnown RBP12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 TFDP1Q14186 410 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 TDRPQ86YL5 185 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 SH3TC2Q8TF17 1288 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 MAIP1Q8WWC4 291 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 C11orf70Q9BRQ4 267 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 IQCGQ9H095 443 aaKnown RBP12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 TMEM206Q9H813 350 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 TAS2R1Q9NYW7 299 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 ANKFY1Q9P2R3 1169 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 SCOCQ9UIL1 159 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 ZNF148Q9UQR1 794 aa12.11□□□□□ -0.47
TM9SF2-201ENST00000376387 LIASO43766 372 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 PROSCO94903 275 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 CYP1A1P04798 512 aaPredicted RBP12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 GYS1P13807 737 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 KCNA2P16389 499 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 DSG3P32926 999 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 CETN2P41208 172 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 CCDC142Q17RM4 750 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 MSS51Q4VC12 460 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 KRT39Q6A163 491 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 CCDC17Q96LX7 622 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 SEZ6LQ9BYH1 1024 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 TRIM4Q9C037 500 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 SAR1AQ9NR31 198 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 CLUHO75153 1309 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 CCDC22O60826 627 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 RNF8O76064 485 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 HAUS5O94927 633 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 TGFB3P10600 412 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 ATF7P17544 494 aaPredicted RBP12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 RANBP1P43487 201 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 THOC5Q13769 683 aaKnown RBP12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 WDR72Q3MJ13 1102 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 CEP55Q53EZ4 464 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 BBOF1Q8ND07 529 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 GATA6Q92908 595 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 FGD4Q96M96 766 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 NT5C1BQ96P26 610 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 RAB20Q9NX57 234 aa12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
TM9SF2-201ENST00000376387 TJP3O95049 919 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 LMNAP02545 664 aaKnown RBP12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 RXRBP28702 533 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 OCRLQ01968 901 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 MDH1BQ5I0G3 518 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 FYB2Q5VWT5 728 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 NLRX1Q86UT6 975 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 SHKBP1Q8TBC3 707 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 WDR83Q9BRX9 315 aaKnown RBP12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 VCXQ9H320 206 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 WDR70Q9NW82 654 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 LARSQ9P2J5 1176 aaKnown RBP12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 RABGEF1Q9UJ41 708 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 TIMM44O43615 452 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 ECE1P42892 770 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 GPC3P51654 580 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 SLC18A1P54219 525 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 SPP2Q13103 211 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 TXNRD3NBQ6F5E7 133 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 B3GNT9Q6UX72 402 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 SV2AQ7L0J3 742 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 NSL1Q96IY1 281 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 TMEM121Q9BTD3 319 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 TMEM120AQ9BXJ8 343 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 ARHGEF4Q9NR80 690 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 KCND2Q9NZV8 630 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 SAE1Q9UBE0 346 aaPredicted RBP12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 SKIP12755 728 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 HSPA1LP34931 641 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 SLC1A1P43005 524 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 SERPINB4P48594 390 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 SOX10P56693 466 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 FNBP1LQ5T0N5 605 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 ANKRD22Q5VYY1 191 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 SPOPLQ6IQ16 392 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 RHOT1Q8IXI2 618 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 VPS52Q8N1B4 723 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 CLPTM1LQ96KA5 538 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 PSMC3IPQ9P2W1 217 aaPredicted RBP12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 FAM198AQ9UFP1 575 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 ZHX2Q9Y6X8 837 aa12.09□□□□□ -0.47
TM9SF2-201ENST00000376387 GH2P01242 217 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms