RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PCDHB18PQ96TA0 734 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 TBC1D22BQ9NU19 505 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 GABBR1Q9UBS5 961 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 SLC34A1Q06495 639 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 PTK6Q13882 451 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 STAT4Q14765 748 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 PDK4Q16654 411 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 EAPPQ56P03 285 aaPredicted RBP13.63□□□□□ -0.23
MSH5-204ENST00000375755 PLEKHG4Q58EX7 1191 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 SLC45A4Q5BKX6 768 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 XKR9Q5GH70 373 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 SWSAP1Q6NVH7 229 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 OTOAQ7RTW8 1153 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 CLNKQ7Z7G1 428 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 NSUN6Q8TEA1 469 aaKnown RBP13.63□□□□□ -0.23
MSH5-204ENST00000375755 AZIN2Q96A70 460 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 GBP5Q96PP8 586 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 DDX50Q9BQ39 737 aaKnown RBP13.63□□□□□ -0.23
MSH5-204ENST00000375755 UBN1Q9NPG3 1134 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 CYLDQ9NQC7 956 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 HOXC10Q9NYD6 342 aa13.63□□□□□ -0.23
MSH5-204ENST00000375755 SOCS7O14512 581 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 FSCN2O14926 492 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 UBTFL6P0CB48 400 aaPredicted RBP13.62□□□□□ -0.23
MSH5-204ENST00000375755 ATF2P15336 505 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 SLC1A5Q15758 541 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 PSPC1Q8WXF1 523 aaKnown RBP13.62□□□□□ -0.23
MSH5-204ENST00000375755 PTPRN2Q92932 1015 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 CDCA5Q96FF9 252 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 HERPUD2Q9BSE4 406 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.62□□□□□ -0.239e-7■■■■■ 47
MSH5-204ENST00000375755 AGPAT3Q9NRZ7 376 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 MAP3K20Q9NYL2 800 aaKnown RBP13.62□□□□□ -0.23
MSH5-204ENST00000375755 CSADQ9Y600 493 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 SLC16A4O15374 487 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 PSMG1O95456 288 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 CYP1A1P04798 512 aaPredicted RBP13.62□□□□□ -0.23
MSH5-204ENST00000375755 GCAP28676 217 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 RPA3P35244 121 aaPredicted RBP13.62□□□□□ -0.23
MSH5-204ENST00000375755 ADCY8P40145 1251 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 PEX3P56589 373 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 MYL7Q01449 175 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 SH3D19Q5HYK7 790 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 FAM102BQ5T8I3 360 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 CYP4F22Q6NT55 531 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 NLRX1Q86UT6 975 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 CCDC60Q8IWA6 550 aaPredicted RBP13.62□□□□□ -0.23
MSH5-204ENST00000375755 C4orf33Q8N1A6 199 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 CCDC77Q9BR77 488 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 TXNRD2Q9NNW7 524 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 NPHS2Q9NP85 383 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 DMAP1Q9NPF5 467 aaPredicted RBP13.62□□□□□ -0.23
MSH5-204ENST00000375755 SAR1AQ9NR31 198 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 KANSL3Q9P2N6 904 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 TCEAL9Q9UHQ7 104 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 EXOC3O60645 756 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 MTA2O94776 668 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 RRM1P23921 792 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 DLG4P78352 724 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 SPDYAQ5MJ70 313 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 NCAPG2Q86XI2 1143 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 ZNF564Q8TBZ8 553 aaPredicted RBP13.62□□□□□ -0.23
MSH5-204ENST00000375755 MORC4Q8TE76 937 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 WDR60Q8WVS4 1066 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 BSNDQ8WZ55 320 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 NUP85Q9BW27 656 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 TRAIPQ9BWF2 469 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 TRABDQ9H4I3 376 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 KRT82Q9NSB4 513 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 ARL8BQ9NVJ2 186 aa13.62□□□□□ -0.23
MSH5-204ENST00000375755 WDR64B1ANS9 1081 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 C2CD2LO14523 706 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 GSC2O15499 205 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 OAZ1P54368 228 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 AP1B1Q10567 949 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 PKN2Q16513 984 aaKnown RBP13.61□□□□□ -0.23
MSH5-204ENST00000375755 CFAP61Q8NHU2 1237 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 LMO3Q8TAP4 145 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 ELMO3Q96BJ8 720 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 NDNQ99608 321 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 CBWD1Q9BRT8 395 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 STRA6Q9BX79 667 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 FAM192AQ9GZU8 254 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 UBE2TQ9NPD8 197 aaPredicted RBP13.61□□□□□ -0.23
MSH5-204ENST00000375755 CEP350Q5VT06 3117 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 PRPF4O43172 522 aaKnown RBP eCLIP13.61□□□□□ -0.23
MSH5-204ENST00000375755 PGK2P07205 417 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 CNPY1Q3B7I2 92 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 Q3C1V9 767 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 WDR72Q3MJ13 1102 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 LBX2Q6XYB7 198 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 ARHGEF19Q8IW93 802 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 SYCP3Q8IZU3 236 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 FAM84AQ96KN4 292 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 BTBD10Q9BSF8 475 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 PDP2Q9P2J9 529 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 WASF2Q9Y6W5 498 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 LOXHD1Q8IVV2 1947 aa13.61□□□□□ -0.23
MSH5-204ENST00000375755 ATP2A1O14983 1001 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms