RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 KLRK1P26718 216 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 RAB27AP51159 221 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 BCAR1P56945 870 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 LAMB3Q13751 1172 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 DPCR1Q3MIW9 517 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 COLEC12Q5KU26 742 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 MTHFD1LQ6UB35 978 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 PLD3Q8IV08 490 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 CDC26Q8NHZ8 85 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 PIK3R5Q8WYR1 880 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 TMEM47Q9BQJ4 181 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 GID8Q9NWU2 228 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 TJP2Q9UDY2 1190 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 PCDHGB4Q9UN71 923 aa6.59□□□□□ -1.35
PTPN3-202ENST00000374541 H0Y3Z8 333 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 GOLGA8RI6L899 631 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 GAS2O43903 313 aaKnown RBP6.59□□□□□ -1.36
PTPN3-202ENST00000374541 MMP1P03956 469 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 KRT7P08729 469 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 PSMA2P25787 234 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 NR5A1Q13285 461 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 CTTNQ14247 550 aaKnown RBP6.59□□□□□ -1.36
PTPN3-202ENST00000374541 TRIM72Q6ZMU5 477 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 EFL1Q7Z2Z2 1120 aaKnown RBP6.59□□□□□ -1.36
PTPN3-202ENST00000374541 JAMLQ86YT9 394 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 PPP1R2P1Q96PQ5 205 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 SENP7Q9BQF6 1050 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 C1QTNF1Q9BXJ1 281 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 KIAA1683Q9H0B3 1180 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 PDP2Q9P2J9 529 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 ZNF711Q9Y462 761 aa6.59□□□□□ -1.36
PTPN3-202ENST00000374541 CHD2O14647 1828 aaKnown RBP6.59□□□□□ -1.36
PTPN3-202ENST00000374541 B3GAT3O94766 335 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ZRANB2O95218 330 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ACSL3O95573 720 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PFKMP08237 780 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 GSPT1P15170 499 aaKnown RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 IFNAR1P17181 557 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 CCND1P24385 295 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 DHPSP49366 369 aaPredicted RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 KLC1Q07866 573 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 WASHC5Q12768 1159 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 MXD4Q14582 209 aaPredicted RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 NFRKBQ6P4R8 1299 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 C16orf89Q6UX73 402 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ENOSF1Q7L5Y1 443 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TDHQ8IZJ6 230 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TAGAPQ8N103 731 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TBC1D19Q8N5T2 526 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TNIP2Q8NFZ5 429 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 AHCYL2Q96HN2 611 aaKnown RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 CLIC6Q96NY7 704 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 XPO6Q96QU8 1125 aaKnown RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 POLR3FQ9H1D9 316 aaPredicted RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ABI2Q9NYB9 513 aaPredicted RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 BFARQ9NZS9 450 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PLA2G4CQ9UP65 541 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 LTBP3Q9NS15 1303 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 KRT87PA6NCN2 255 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 RCAN1P53805 252 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PMS1P54277 932 aaKnown RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 DYNLT1P63172 113 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 GPC5P78333 572 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 SCARA5Q6ZMJ2 495 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 LRRC8DQ7L1W4 858 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 FBXO33Q7Z6M2 555 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 BBS7Q8IWZ6 715 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 RSPH1Q8WYR4 309 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 SNF8Q96H20 258 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 UVRAGQ9P2Y5 699 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 SOWAHDA6NJG2 315 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 COBLO75128 1261 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PEX3P56589 373 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 GUCY1A3Q02108 690 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 BEND6Q5SZJ8 279 aaPredicted RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TDRD10Q5VZ19 366 aaKnown RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 USP17L6PQ6QN14 398 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 C11orf57Q6ZUT1 292 aaPredicted RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ZNF579Q8NAF0 562 aaKnown RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 PDCD6IPQ8WUM4 868 aaKnown RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 NDEL1Q9GZM8 345 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 AASDHPPTQ9NRN7 309 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ADA2Q9NZK5 511 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 STAP1Q9ULZ2 295 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 STRCQ7RTU9 1775 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 A0A0D9SFI3 127 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TBC1D4O60343 1298 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 TBXAS1P24557 533 aaPredicted RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ADD1P35611 737 aaKnown RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 HSPA9P38646 679 aaKnown RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 AP3M2P53677 418 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 RPS6P62753 249 aaKnown RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 SCRN1Q12765 414 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ZMYM1Q5SVZ6 1142 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 SYCP2LQ5T4T6 812 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ZNF280DQ6N043 979 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 RAB42Q8N4Z0 105 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 BHMTQ93088 406 aa6.58□□□□□ -1.36
PTPN3-202ENST00000374541 UHRF1Q96T88 793 aaPredicted RBP6.58□□□□□ -1.36
PTPN3-202ENST00000374541 ADAM2Q99965 735 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms