RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 EMC10Q5UCC4 262 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 BNC2Q6ZN30 1099 aaPredicted RBP10.7□□□□□ -0.7
CD28-202ENST00000374481 ZNF572Q7Z3I7 529 aaPredicted RBP10.7□□□□□ -0.7
CD28-202ENST00000374481 CALN1Q9BXU9 219 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 PCDH12Q9NPG4 1184 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 COPG2Q9UBF2 871 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 CLEC11AQ9Y240 323 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 TULP4Q9NRJ4 1543 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 A0A0J9YVX5 310 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 CLASP2O75122 1294 aaKnown RBP10.7□□□□□ -0.7
CD28-202ENST00000374481 KRT7P08729 469 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 CCNB1P14635 433 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 TKTP29401 623 aaKnown RBP10.7□□□□□ -0.7
CD28-202ENST00000374481 CASP2P42575 452 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 SLC5A3P53794 718 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 EIF6P56537 245 aaKnown RBP10.7□□□□□ -0.7
CD28-202ENST00000374481 CENPPQ6IPU0 288 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 OTOAQ7RTW8 1153 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 CDH24Q86UP0 819 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 DGKHQ86XP1 1220 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 MICU2Q8IYU8 434 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 PPP1R36Q96LQ0 422 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 TSPAN18Q96SJ8 248 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 SEMA6BQ9H3T3 888 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 RAD21L1Q9H4I0 556 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 UVRAGQ9P2Y5 699 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 SLC24A2Q9UI40 661 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 PFDN6O15212 129 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 SPAG6O75602 509 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 ACADVLP49748 655 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 INTS2Q9H0H0 1204 aaKnown RBP10.7□□□□□ -0.7
CD28-202ENST00000374481 PCIF1Q9H4Z3 704 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 MARCH7Q9H992 704 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 CHORDC1Q9UHD1 332 aaPredicted RBP10.7□□□□□ -0.7
CD28-202ENST00000374481 JAG2Q9Y219 1238 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 TPST1O60507 370 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 SNRPAP09012 282 aaKnown RBP10.7□□□□□ -0.7
CD28-202ENST00000374481 WEE2P0C1S8 567 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 HNRNPH3P31942 346 aaKnown RBP10.7□□□□□ -0.7
CD28-202ENST00000374481 MCAMP43121 646 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 CLK1P49759 484 aaKnown RBP10.7□□□□□ -0.7
CD28-202ENST00000374481 OXCT1P55809 520 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 SLC25A3Q00325 362 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 MFSD5Q6N075 450 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 ZFP1Q6P2D0 407 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 KLHDC10Q6PID8 442 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 PTF1AQ7RTS3 328 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 GSTCDQ8NEC7 633 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 SCFD1Q8WVM8 642 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 HDAC11Q96DB2 347 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 DEPDC5O75140 1603 aa10.7□□□□□ -0.7
CD28-202ENST00000374481 PDE8BO95263 885 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 TNNC2P02585 160 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 FDFT1P37268 417 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 MRPS22P82650 360 aaKnown RBP10.69□□□□□ -0.7
CD28-202ENST00000374481 BFSP2Q13515 415 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 NRF1Q16656 503 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 NDUFAF2Q8N183 169 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 SPATA20Q8TB22 786 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 OTUD5Q96G74 571 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 WNK4Q96J92 1243 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 CNDP1Q96KN2 507 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 CHID1Q9BWS9 393 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 PSTPIP2Q9H939 334 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 KBTBD4Q9NVX7 518 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 LMTK2Q8IWU2 1503 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 CYP2D7A0A087X1C5 515 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 TRIM49D1C9J1S8 452 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 EPHB6O15197 1021 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 ALOX5P09917 674 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 SNX16P57768 344 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 ALX1Q15699 326 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 FASTKD5Q7L8L6 764 aaKnown RBP10.69□□□□□ -0.7
CD28-202ENST00000374481 SETD3Q86TU7 594 aaPredicted RBP10.69□□□□□ -0.7
CD28-202ENST00000374481 SEPT12Q8IYM1 358 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 ENDOVQ8N8Q3 282 aaKnown RBP10.69□□□□□ -0.7
CD28-202ENST00000374481 TRPC4APQ8TEL6 797 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 CORO1BQ9BR76 489 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 GCOM2Q9BZD3 368 aaPredicted RBP10.69□□□□□ -0.7
CD28-202ENST00000374481 ALADP13716 330 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 ATP2B4P23634 1241 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 WASHC5Q12768 1159 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 MRPL28Q13084 256 aaKnown RBP10.69□□□□□ -0.7
CD28-202ENST00000374481 SPIDRQ14159 915 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 DNAJC24Q6P3W2 148 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 SCYL2Q6P3W7 929 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 NOP9Q86U38 636 aaKnown RBP10.69□□□□□ -0.7
CD28-202ENST00000374481 TTC13Q8NBP0 860 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 PKD2L1Q9P0L9 805 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 TUBGCP4Q9UGJ1 667 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 SIK3Q9Y2K2 1263 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 SPEF1Q9Y4P9 236 aa10.69□□□□□ -0.7
CD28-202ENST00000374481 GPR75-ASB3A0A0A6YYF3 556 aa10.68□□□□□ -0.7
CD28-202ENST00000374481 ESYT2A0FGR8 921 aa10.68□□□□□ -0.7
CD28-202ENST00000374481 FBP2O00757 339 aa10.68□□□□□ -0.7
CD28-202ENST00000374481 PHGDHO43175 533 aaKnown RBP10.68□□□□□ -0.7
CD28-202ENST00000374481 CD58P19256 250 aa10.68□□□□□ -0.7
CD28-202ENST00000374481 RALGDSQ12967 914 aa10.68□□□□□ -0.7
CD28-202ENST00000374481 NTRK3Q16288 839 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms