RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 BTBD9Q96Q07 612 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 TM6SF1Q9BZW5 370 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 UBAP1Q9NZ09 502 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 RNF112Q9ULX5 631 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 SMNDC1O75940 238 aaKnown RBP eCLIP9.42□□□□□ -0.94e-23■■■■■ 82.8
PTPRT-206ENST00000373198 CAMK1Q14012 370 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ZNF589Q86UQ0 364 aaPredicted RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 C10orf88Q9H8K7 445 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 STIP1P31948 543 aaKnown RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 POLD3Q15054 466 aaPredicted RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 LRRC8DQ7L1W4 858 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 IQCF2Q8IXL9 164 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 RNFT2Q96EX2 444 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 MED15Q96RN5 788 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 SMIM31A0A1B0GVY4 71 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 CLTBP09497 229 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 TRIM49P0CI25 452 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 TRIM49CP0CI26 452 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ALDH7A1P49419 539 aaKnown RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 PI16Q6UXB8 463 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ACAD9Q9H845 621 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 TRIM39Q9HCM9 518 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ASS1P00966 412 aaKnown RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 MYBL1P10243 752 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 SLC39A14Q15043 492 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 MTFR1Q15390 333 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 CYP4A22Q5TCH4 519 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 MTHFD1LQ6UB35 978 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 RHOT1Q8IXI2 618 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 CPA5Q8WXQ8 436 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ABCB1P08183 1280 aaPredicted RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 KRT16P08779 473 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 TXNP10599 105 aaKnown RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ANXA11P50995 505 aaKnown RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 LAMB3Q13751 1172 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ARMC4Q5T2S8 1044 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 TLR7Q9NYK1 1049 aaKnown RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 PMPCBO75439 489 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ZNF682O95780 498 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 CCNE1P24864 410 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 GRK4P32298 578 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 QARSP47897 775 aaKnown RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 KRT76Q01546 638 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 STX4Q12846 297 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 STARD3Q14849 445 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ZNF544Q6NX49 715 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 S100A13Q99584 98 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ZSWIM5Q9P217 1185 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 TMCC3Q9ULS5 477 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 TPRP12270 2363 aaKnown RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 SNTNA6NMZ2 147 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 EEF2KO00418 725 aaKnown RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ITGA4P13612 1032 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 PRPF39Q86UA1 669 aaKnown RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 OXCT2Q9BYC2 517 aaPredicted RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 STK33Q9BYT3 514 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 DYRK1BQ9Y463 629 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 EMSYQ7Z589 1322 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 SH2B2O14492 632 aaPredicted RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 CYP2D6P10635 497 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 CYLC2Q14093 348 aaPredicted RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 TERF2Q15554 542 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 CAMKK2Q96RR4 588 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 NMRK1Q9NWW6 199 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L10C9JJH3 530 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 TAF1CQ15572 869 aaPredicted RBP9.41□□□□□ -0.9
PTPRT-206ENST00000373198 KLHL17Q6TDP4 642 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 RBBP8Q99708 897 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 AAASQ9NRG9 546 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 UMPSP11172 480 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 LBPP18428 481 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 ADD2P35612 726 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 UBE3CQ15386 1083 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 ZNF713Q8N859 430 aaPredicted RBP9.41□□□□□ -0.9
PTPRT-206ENST00000373198 XPO6Q96QU8 1125 aaKnown RBP9.41□□□□□ -0.9
PTPRT-206ENST00000373198 WWP1Q9H0M0 922 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 AVENQ9NQS1 362 aaPredicted RBP9.41□□□□□ -0.9
PTPRT-206ENST00000373198 KLHL20Q9Y2M5 609 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 PRKCBP05771 671 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 SCNN1BP51168 640 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 STX12Q86Y82 276 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 PHACTR1Q9C0D0 580 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 CYP39A1Q9NYL5 469 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 UGGT2Q9NYU1 1516 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 JAK1P23458 1154 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 KIF2BQ8N4N8 673 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 SERAC1Q96JX3 654 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 CALR3Q96L12 384 aaKnown RBP9.41□□□□□ -0.9
PTPRT-206ENST00000373198 YME1L1Q96TA2 773 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 INTS13Q9NVM9 706 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
PTPRT-206ENST00000373198 ARMCX6Q7L4S7 300 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 TMEM260Q9NX78 707 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 FBXO10Q9UK96 956 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 SPAG17Q6Q759 2223 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 hCG_1984214I3L0E3 225 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 TPST1O60507 370 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 MBL2P11226 248 aaPredicted RBP9.41□□□□□ -0.9
PTPRT-206ENST00000373198 KYAT1Q16773 422 aa9.41□□□□□ -0.9
PTPRT-206ENST00000373198 CEP72Q9P209 647 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms