RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 TSPAN17Q96FV3 270 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 SLC4A9Q96Q91 983 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 NUDT12Q9BQG2 462 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 PPME1Q9Y570 386 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 CYP3A4P08684 503 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 C6orf222P0C671 652 aaPredicted RBP12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 TGFB3P10600 412 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 STMN1P16949 149 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 GNL1P36915 607 aaPredicted RBP12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 RAD51Q06609 339 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 NSUN2Q08J23 767 aaKnown RBP eCLIP12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 APOBEC3HQ6NTF7 200 aaKnown RBP12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 LVRNQ6Q4G3 990 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 SLC26A7Q8TE54 656 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 MKL1Q969V6 931 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 ADAM33Q9BZ11 813 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 KLHL2O95198 593 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 KRT4P19013 534 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 DCAF6Q58WW2 860 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 TTC39BQ5VTQ0 682 aaPredicted RBP12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 ATPAF2Q8N5M1 289 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 ZKSCAN4Q969J2 545 aaPredicted RBP12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 DDX4Q9NQI0 724 aaKnown RBP12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 RIC1Q4ADV7 1423 aa12.39□□□□□ -0.43
DEPDC1-201ENST00000370966 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 ITGA4P13612 1032 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 ARHGDIAP52565 204 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 GOLGA7BQ2TAP0 167 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 CYP4A22Q5TCH4 519 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 ERO1BQ86YB8 467 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 CCNJLQ8IV13 435 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 WDR49Q8IV35 697 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 FAM71DQ8N9W8 422 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 DNERQ8NFT8 737 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 DDX50Q9BQ39 737 aaKnown RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 NAT9Q9BTE0 207 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 MROH8Q9H579 483 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 RNF103-CHMP3A0A140T963 221 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 UBA6A0AVT1 1052 aaPredicted RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 TRIM66O15016 1216 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 GLI1P08151 1106 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 GRIK1P39086 918 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 CTCFP49711 727 aaPredicted RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 GCNT1Q02742 428 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 CXCL9Q07325 125 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 PDK2Q15119 407 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 CALML6Q8TD86 181 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 PARD3BQ8TEW8 1205 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 VCPIP1Q96JH7 1222 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 MTMR12Q9C0I1 747 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 CYP3A43Q9HB55 503 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 GGT7Q9UJ14 662 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 SCAF8Q9UPN6 1271 aaKnown RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 NNMTP40261 264 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 KDSRQ06136 332 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 EZH2Q15910 746 aaKnown RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 RARS2Q5T160 578 aaKnown RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 RNF135Q8IUD6 432 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 CYP2W1Q8TAV3 490 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 RMDN1Q96DB5 314 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 ATXN7L3BQ96GX2 97 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 KCNK16Q96T55 309 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 TRIM54Q9BYV2 358 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 PCMTD2Q9NV79 361 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 LMCD1Q9NZU5 365 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 CUL3Q13618 768 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 USP10Q14694 798 aaKnown RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 IMPG1Q17R60 797 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 NAPEPLDQ6IQ20 393 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 CATSPER1Q8NEC5 780 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 PTPRN2Q92932 1015 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 KRT82Q9NSB4 513 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 DPP3Q9NY33 737 aa12.38□□□□□ -0.43
DEPDC1-201ENST00000370966 FAM200BP0CF97 657 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CCND1P24385 295 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 FDFT1P37268 417 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 RHBDL3P58872 404 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 DACT2Q5SW24 774 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 FBXW10Q5XX13 1052 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 ICA1LQ8NDH6 482 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CDC26Q8NHZ8 85 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 ATG4AQ8WYN0 398 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 STAMBPL1Q96FJ0 436 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 ASIC4Q96FT7 647 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CATSPERBQ9H7T0 1116 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 PPP2R3BQ9Y5P8 575 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 BMP6P22004 513 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 OAZ1P54368 228 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 CLEC16AQ2KHT3 1053 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 SYCP2LQ5T4T6 812 aa12.37□□□□□ -0.43
DEPDC1-201ENST00000370966 METTL7BQ6UX53 244 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms