RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 SMC6Q96SB8 1091 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 RBM15Q96T37 977 aaKnown RBP eCLIP7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 KATNAL1Q9BW62 490 aa7.51□□□□□ -1.21
TGFBR3-202ENST00000370399 N4BP2Q86UW6 1770 aaPredicted RBP7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 PAPPAQ13219 1627 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 CASTOR2A6NHX0 329 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 PROSCO94903 275 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 CPP00450 1065 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 APRTP07741 180 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 SEC24CP53992 1094 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 EIF3BP55884 814 aaKnown RBP7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 PTENP60484 403 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 SETDB1Q15047 1291 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 C6orf118Q5T5N4 469 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 LGSNQ5TDP6 509 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 NUGGCQ68CJ6 796 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 FAM117BQ6P1L5 589 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 SCUBE3Q8IX30 993 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 RCOR2Q8IZ40 523 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 TSEN2Q8NCE0 465 aaKnown RBP7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 MFSD14AQ96MC6 490 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 CFAP57Q96MR6 1250 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 AGAP3Q96P47 875 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 ZNF112Q9UJU3 913 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 CHD4Q14839 1912 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 GOLGA8RI6L899 631 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 RECQL4O94761 1208 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 GHRP10912 638 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 PRUNE1Q86TP1 453 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 CPNE8Q86YQ8 564 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 C12orf29Q8N999 325 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 HELQQ8TDG4 1101 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 TMEM121Q9BTD3 319 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 TMEM134Q9H6X4 195 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 TSPAN16Q9UKR8 245 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 RPTORQ8N122 1335 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 PRRC2BQ5JSZ5 2229 aaKnown RBP7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 CCDC78A2IDD5 438 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 KCNN4O15554 427 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 POMCP01189 267 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 SLC4A1P02730 911 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 ACO1P21399 889 aaKnown RBP7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 EIF4BP23588 611 aaKnown RBP7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 PDE1BQ01064 536 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 AP1B1Q10567 949 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 MFSD10Q14728 455 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 FAM71DQ8N9W8 422 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 TTC13Q8NBP0 860 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 MDM1Q8TC05 714 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 IFT122Q9HBG6 1241 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 RAB6BQ9NRW1 208 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 CHST7Q9NS84 486 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 WDR35Q9P2L0 1181 aa7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 UBQLN1Q9UMX0 589 aaKnown RBP7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 DDX60Q8IY21 1712 aaKnown RBP7.5□□□□□ -1.21
TGFBR3-202ENST00000370399 GPR25O00155 361 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 SPAG7O75391 227 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 TRPA1O75762 1119 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 SRGAP2BP0DMP2 458 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 BRAFP15056 766 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ADCY2Q08462 1091 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 PDZD4Q76G19 769 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 PLPPR4Q7Z2D5 763 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 FBF1Q8TES7 1133 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 BRI3BPQ8WY22 251 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ELAC2Q9BQ52 826 aaKnown RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 SEMA4AQ9H3S1 761 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 VIPAS39Q9H9C1 493 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 KLHL8Q9P2G9 620 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 COG5Q9UP83 839 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 LRP5O75197 1615 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ZMYM2Q9UBW7 1377 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 CD4P01730 458 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ALDH3A1P30838 453 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 TAF6P49848 677 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 FSCN1Q16658 493 aaKnown RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 KYAT1Q16773 422 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 IQSEC1Q6DN90 963 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 DENND1BQ6P3S1 775 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 MFSD7Q6UXD7 560 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 KDELC2Q7Z4H8 507 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 FAM131BQ86XD5 332 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 TMEM192Q8IY95 271 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 PPM1NQ8N819 430 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 RXFP2Q8WXD0 754 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ZBED3Q96IU2 234 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 GLT1D1Q96MS3 346 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 STAP1Q9ULZ2 295 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 NEU2Q9Y3R4 380 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 NR2E1Q9Y466 385 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 CAPN7Q9Y6W3 813 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 SHANK3Q9BYB0 1731 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ZBTB22O15209 634 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 RFC1P35251 1148 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ARL2P36404 184 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ARL4CP56559 192 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 RTP1P59025 263 aa7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 ZNF200P98182 395 aaPredicted RBP7.49□□□□□ -1.21
TGFBR3-202ENST00000370399 CDC42EP1Q00587 391 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms