RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 DNALI1O14645 258 aaPredicted RBP11.48□□□□□ -0.57
LRIF1-201ENST00000369763 EXTL3O43909 919 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 GRAP2O75791 330 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 TJP3O95049 919 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 CYP1A1P04798 512 aaPredicted RBP11.48□□□□□ -0.57
LRIF1-201ENST00000369763 ACO1P21399 889 aaKnown RBP11.48□□□□□ -0.57
LRIF1-201ENST00000369763 HSPA1LP34931 641 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 GCKP35557 465 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 CDH8P55286 799 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 SP2Q02086 613 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 PLEKHG4Q58EX7 1191 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 RFWD3Q6PCD5 774 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 C10orf71Q711Q0 1435 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 PALM2Q8IXS6 379 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 ACTL9Q8TC94 416 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 IMPG2Q9BZV3 1241 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 DONSONQ9NYP3 566 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 ARMCX1Q9P291 453 aa11.48□□□□□ -0.57
LRIF1-201ENST00000369763 KITP10721 976 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 CCND1P24385 295 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 IRX4P78413 519 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 OTUD4Q01804 1114 aaKnown RBP11.47□□□□□ -0.57
LRIF1-201ENST00000369763 TCEAL1Q15170 157 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 HIF1AQ16665 826 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 CDO1Q16878 200 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 CRELD2Q6UXH1 353 aaPredicted RBP11.47□□□□□ -0.57
LRIF1-201ENST00000369763 SPOCD1Q6ZMY3 1216 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 APBB1IPQ7Z5R6 666 aaPredicted RBP11.47□□□□□ -0.57
LRIF1-201ENST00000369763 TCP10LQ8TDR4 215 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 SLCO2A1Q92959 643 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 FBXL18Q96ME1 805 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 MARCOQ9UEW3 520 aaPredicted RBP11.47□□□□□ -0.57
LRIF1-201ENST00000369763 ZFP69BQ9UJL9 534 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 CCDC195A0A1B0GUA6 201 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 MAPK13O15264 365 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
LRIF1-201ENST00000369763 DGAT1O75907 488 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 FAM155BO75949 473 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 GLRA2P23416 452 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 PSMA2P25787 234 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 RFC1P35251 1148 aaPredicted RBP11.47□□□□□ -0.57
LRIF1-201ENST00000369763 CAV1Q03135 178 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 ASRGL1Q7L266 308 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 CTAGE3PQ8IX95 158 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 KATNAL2Q8IYT4 538 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 LRRC71Q8N4P6 559 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 FAM13CQ8NE31 585 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 FBXO36Q8NEA4 188 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 EXD1Q8NHP7 514 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 RSAD2Q8WXG1 361 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 PTPRN2Q92932 1015 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 FAM81BQ96LP2 452 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 TRIM6Q9C030 488 aaPredicted RBP11.47□□□□□ -0.57
LRIF1-201ENST00000369763 AVENQ9NQS1 362 aaPredicted RBP11.47□□□□□ -0.57
LRIF1-201ENST00000369763 ANKEF1Q9NU02 776 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 SLC9A2Q9UBY0 812 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 PSTPIP1O43586 416 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 ALDH3A1P30838 453 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 SFNP31947 248 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 GPX6P59796 221 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 BPIFB4P59827 614 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 RAB6CQ53S08 254 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 NPNTQ6UXI9 565 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 CENPUQ71F23 418 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 NLRP9Q7RTR0 991 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 CCDC125Q86Z20 511 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 JOSD2Q8TAC2 188 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 TFAP2BQ92481 460 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 ZNF75CPQ92670 426 aaPredicted RBP11.47□□□□□ -0.57
LRIF1-201ENST00000369763 TRIM56Q9BRZ2 755 aaKnown RBP11.47□□□□□ -0.57
LRIF1-201ENST00000369763 RAB6CQ9H0N0 254 aa11.47□□□□□ -0.57
LRIF1-201ENST00000369763 PSAPP07602 524 aa11.46□□□□□ -0.57
LRIF1-201ENST00000369763 NAIF1Q69YI7 327 aaPredicted RBP11.46□□□□□ -0.57
LRIF1-201ENST00000369763 SYDE1Q6ZW31 735 aaPredicted RBP11.46□□□□□ -0.57
LRIF1-201ENST00000369763 TTC7BQ86TV6 843 aa11.46□□□□□ -0.57
LRIF1-201ENST00000369763 SCYL3Q8IZE3 742 aa11.46□□□□□ -0.57
LRIF1-201ENST00000369763 CEP120Q8N960 986 aa11.46□□□□□ -0.57
LRIF1-201ENST00000369763 MAGEC3Q8TD91 643 aa11.46□□□□□ -0.57
LRIF1-201ENST00000369763 ST6GALNAC4Q9H4F1 302 aa11.46□□□□□ -0.57
LRIF1-201ENST00000369763 TXLNGQ9NUQ3 528 aa11.46□□□□□ -0.57
LRIF1-201ENST00000369763 USH1CQ9Y6N9 552 aa11.46□□□□□ -0.57
LRIF1-201ENST00000369763 SLX4Q8IY92 1834 aa11.46□□□□□ -0.57
LRIF1-201ENST00000369763 VWA5AO00534 786 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 ATP2A1O14983 1001 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 IL1R2P27930 398 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 CCND2P30279 289 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 YWHAGP61981 247 aaKnown RBP eCLIP11.46□□□□□ -0.58
LRIF1-201ENST00000369763 CNTN2Q02246 1040 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 TRIM50Q86XT4 487 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 ALLCQ8N6M5 410 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 TRIM11Q96F44 468 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 FAM111AQ96PZ2 611 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 PAFAH2Q99487 392 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 IP6K2Q9UHH9 426 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 UBR3Q6ZT12 1888 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.58
LRIF1-201ENST00000369763 WDR46O15213 610 aaKnown RBP11.45□□□□□ -0.58
LRIF1-201ENST00000369763 LYPLA2O95372 231 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms