RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 PLD1Q13393 1074 aa22.06■■□□□ 1.12
SMNDC1-201ENST00000369592 PNOCQ13519 176 aa22.06■■□□□ 1.12
SMNDC1-201ENST00000369592 ELOA2Q8IYF1 753 aaPredicted RBP22.06■■□□□ 1.12
SMNDC1-201ENST00000369592 ING5Q8WYH8 240 aa22.06■■□□□ 1.12
SMNDC1-201ENST00000369592 FNBP1Q96RU3 617 aa22.06■■□□□ 1.12
SMNDC1-201ENST00000369592 ASB3Q9Y575 518 aa22.06■■□□□ 1.12
SMNDC1-201ENST00000369592 PTPRDP23468 1912 aa22.06■■□□□ 1.12
SMNDC1-201ENST00000369592 CACNA1HO95180 2353 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 LRRIQ3A6PVS8 624 aaPredicted RBP22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 ZNF197O14709 1029 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 MAPK13O15264 365 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 C4BPAP04003 597 aaKnown RBP22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 FAM163BP0C2L3 166 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 HAPLN1P10915 354 aaPredicted RBP22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 SRFP11831 508 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 PTPN5P54829 565 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 MYO1EQ12965 1108 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 COBLL1Q53SF7 1204 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 C1orf220Q5T0J3 134 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 SPPL2BQ8TCT7 592 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 PSMG2Q969U7 264 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 CCDC47Q96A33 483 aaKnown RBP22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 VRTNQ9H8Y1 702 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 SLC2A4RGQ9NR83 387 aa22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 DDX43Q9NXZ2 648 aaKnown RBP22.05■■□□□ 1.12
SMNDC1-201ENST00000369592 HCRTO43612 131 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 SOAT2O75908 522 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 KIF20AO95235 890 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 NPR3P17342 541 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 ATF6P18850 670 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 FCARP24071 287 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 LHX1P48742 406 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 TUFMP49411 452 aaKnown RBP22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 EPHB3P54753 998 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 INTS6LQ5JSJ4 861 aaKnown RBP22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 IQCEQ6IPM2 695 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 FAM171BQ6P995 826 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 MTSS1LQ765P7 747 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 DCP1BQ8IZD4 617 aaKnown RBP22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 ADGRF2Q8IZF7 708 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 ELMOD1Q8N336 334 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 SHKBP1Q8TBC3 707 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 TMC2Q8TDI7 906 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 MCRS1Q96EZ8 462 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 WNT16Q9UBV4 365 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 NME7Q9Y5B8 376 aa22.04■■□□□ 1.12
SMNDC1-201ENST00000369592 WARSP23381 471 aaKnown RBP22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 ALDH1A3P47895 512 aa22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 AP3M2P53677 418 aa22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 DLG4P78352 724 aa22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 CYP4A22Q5TCH4 519 aa22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 TDRD10Q5VZ19 366 aaKnown RBP22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 PDZD4Q76G19 769 aaPredicted RBP22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 DNAJB7Q7Z6W7 309 aaPredicted RBP22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 ST13P5Q8NFI4 369 aaPredicted RBP22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 ZSWIM3Q96MP5 696 aa22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 GSDMAQ96QA5 445 aa22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 ZNF334Q9HCZ1 680 aaPredicted RBP22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 ABCB6Q9NP58 842 aa22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 ASAH2Q9NR71 780 aa22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 MAPK8IP1Q9UQF2 711 aa22.03■■□□□ 1.12
SMNDC1-201ENST00000369592 GREB1Q4ZG55 1949 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 GOLGA6L4A6NEF3 574 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 CALUO43852 315 aaPredicted RBP22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 TACC1O75410 805 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 ECI2O75521 394 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 VNN1O95497 513 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 ACAT1P24752 427 aaKnown RBP22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 VCPP55072 806 aaKnown RBP22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 MYL6P60660 151 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 MYL7Q01449 175 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 TSPY1Q01534 308 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 ENPEPQ07075 957 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 NFE2Q16621 373 aaPredicted RBP22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 CCDC142Q17RM4 750 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 IER5LQ5T953 404 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 GAREM2Q75VX8 874 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 CCDC34Q96HJ3 373 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 MKNK1Q9BUB5 465 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 TRPV4Q9HBA0 871 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 IL21Q9HBE4 155 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 PCDHB5Q9Y5E4 795 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 PCDHA5Q9Y5H7 936 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 OBSL1O75147 1896 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 USP34Q70CQ2 3546 aa22.02■■□□□ 1.12
SMNDC1-201ENST00000369592 KRBA1A5PL33 1030 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 TULP1O00294 542 aaPredicted RBP22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 IKBKBO14920 756 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 AKAP3O75969 853 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 LMO2P25791 158 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 AVPR2P30518 371 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 ATICP31939 592 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 EDRF1Q3B7T1 1238 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 ZACNQ401N2 412 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 CFAP221Q4G0U5 840 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 FAM78AQ5JUQ0 283 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 SMYD4Q8IYR2 804 aaPredicted RBP22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 ASB16Q96NS5 453 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 LPIN3Q9BQK8 851 aa22.01■■□□□ 1.11
SMNDC1-201ENST00000369592 PLA2G2FQ9BZM2 168 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms