RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 HELQQ8TDG4 1101 aa17.78■□□□□ 0.44
DKC1-201ENST00000369550 TTC17Q96AE7 1141 aa17.78■□□□□ 0.44
DKC1-201ENST00000369550 OLFM3Q96PB7 478 aa17.78■□□□□ 0.44
DKC1-201ENST00000369550 PAFAH2Q99487 392 aa17.78■□□□□ 0.44
DKC1-201ENST00000369550 NMUR2Q9GZQ4 415 aa17.78■□□□□ 0.44
DKC1-201ENST00000369550 KCNK13Q9HB14 408 aa17.78■□□□□ 0.44
DKC1-201ENST00000369550 F8W8V4 182 aa17.77■□□□□ 0.44
DKC1-201ENST00000369550 SSTR1P30872 391 aa17.77■□□□□ 0.44
DKC1-201ENST00000369550 UBXN2AP68543 259 aa17.77■□□□□ 0.44
DKC1-201ENST00000369550 HIF1AQ16665 826 aa17.77■□□□□ 0.44
DKC1-201ENST00000369550 EFHC2Q5JST6 749 aa17.77■□□□□ 0.44
DKC1-201ENST00000369550 RIPOR1Q6ZS17 1223 aa17.77■□□□□ 0.44
DKC1-201ENST00000369550 PYROXD1Q8WU10 500 aa17.77■□□□□ 0.44
DKC1-201ENST00000369550 RBM17Q96I25 401 aaKnown RBP17.77■□□□□ 0.44
DKC1-201ENST00000369550 CCDC28BQ9BUN5 200 aa17.77■□□□□ 0.44
DKC1-201ENST00000369550 AVENQ9NQS1 362 aaPredicted RBP17.77■□□□□ 0.44
DKC1-201ENST00000369550 MYH11P35749 1972 aa17.77■□□□□ 0.44
DKC1-201ENST00000369550 LPXNO60711 386 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 DLDP09622 509 aaKnown RBP17.77■□□□□ 0.43
DKC1-201ENST00000369550 IL1R1P14778 569 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 RAP1GDS1P52306 607 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 ARL4CP56559 192 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 PTP4A2Q12974 167 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 EAPPQ56P03 285 aaPredicted RBP17.77■□□□□ 0.43
DKC1-201ENST00000369550 MDH1BQ5I0G3 518 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 C1orf146Q5VVC0 180 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 PADI6Q6TGC4 694 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 MARK2Q7KZI7 788 aaKnown RBP17.77■□□□□ 0.43
DKC1-201ENST00000369550 ALYREFQ86V81 257 aaKnown RBP17.77■□□□□ 0.43
DKC1-201ENST00000369550 TMPRSS6Q8IU80 811 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 SCUBE1Q8IWY4 988 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 KATNAL2Q8IYT4 538 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 NCSTNQ92542 709 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 TRIM11Q96F44 468 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 PHACTR1Q9C0D0 580 aa17.77■□□□□ 0.43
DKC1-201ENST00000369550 PDLIM1O00151 329 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 MAGEC1O60732 1142 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 ADRB2P07550 413 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 CYP3A4P08684 503 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 GPX6P59796 221 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 NFX1Q12986 1120 aaKnown RBP17.76■□□□□ 0.43
DKC1-201ENST00000369550 CDC16Q13042 620 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 TRMT5Q32P41 509 aaKnown RBP17.76■□□□□ 0.43
DKC1-201ENST00000369550 CBWD2Q8IUF1 395 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 BANPQ8N9N5 519 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 EXD1Q8NHP7 514 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.76■□□□□ 0.437e-9■■■■□ 21.3
DKC1-201ENST00000369550 HAUS1Q96CS2 278 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 CLPTM1LQ96KA5 538 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 IL1RAPL1Q9NZN1 696 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 SH3BP1Q9Y3L3 701 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 FAM237BA0A1B0GVD1 139 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 USP1O94782 785 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 UNGP13051 313 aaPredicted RBP17.76■□□□□ 0.43
DKC1-201ENST00000369550 ATP2B4P23634 1241 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 KDSRQ06136 332 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 MTM1Q13496 603 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 SHROOM1Q2M3G4 852 aaPredicted RBP17.76■□□□□ 0.43
DKC1-201ENST00000369550 C3orf62Q6ZUJ4 267 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 NET1Q7Z628 596 aaPredicted RBP17.76■□□□□ 0.43
DKC1-201ENST00000369550 TAS1R2Q8TE23 839 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 PPP2R3CQ969Q6 453 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 ALKBH8Q96BT7 664 aaKnown RBP17.76■□□□□ 0.43
DKC1-201ENST00000369550 THTPAQ9BU02 230 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 RABGEF1Q9UJ41 708 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 GGA1Q9UJY5 639 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 PHF24Q9UPV7 400 aa17.76■□□□□ 0.43
DKC1-201ENST00000369550 SGK1O00141 431 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 RNASEH1O60930 286 aaKnown RBP17.75■□□□□ 0.43
DKC1-201ENST00000369550 TGDSO95455 350 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 BGNP21810 368 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 GLRA2P23416 452 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 GTF2IP78347 998 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 SNRNP35Q16560 246 aaKnown RBP17.75■□□□□ 0.43
DKC1-201ENST00000369550 TRIM74Q86UV6 250 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 TRIM73Q86UV7 250 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 ALLCQ8N6M5 410 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.75■□□□□ 0.434e-6■□□□□ 8.6
DKC1-201ENST00000369550 ATP11CQ8NB49 1132 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 KLHL23Q8NBE8 558 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 RBM15BQ8NDT2 890 aaKnown RBP17.75■□□□□ 0.43
DKC1-201ENST00000369550 FBXL13Q8NEE6 735 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 FAM111AQ96PZ2 611 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 EP400Q96L91 3159 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 CFBP00751 764 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 MT-ND3P03897 115 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 CRABP2P29373 138 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 MAP7Q14244 749 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 LRRC36Q1X8D7 754 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 RNASEH2BQ5TBB1 312 aaKnown RBP17.75■□□□□ 0.43
DKC1-201ENST00000369550 KRT27Q7Z3Y8 459 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 NME8Q8N427 588 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 SLC25A41Q8N5S1 370 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 FBXO27Q8NI29 283 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 HIC2Q96JB3 615 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 PANX3Q96QZ0 392 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 HAPLN3Q96S86 360 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 C11orf70Q9BRQ4 267 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 RAB20Q9NX57 234 aa17.75■□□□□ 0.43
DKC1-201ENST00000369550 SHOC2Q9UQ13 582 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms