RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 ITIH6Q6UXX5 1313 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 PHKG1Q16816 387 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 SPASTQ9UBP0 616 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 DBR1Q9UK59 544 aaKnown RBP18.7■□□□□ 0.58
SNX27-203ENST00000368843 EIF3DO15371 548 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNX27-203ENST00000368843 GUCA1CO95843 209 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 ITPK1Q13572 414 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 TFB1MQ8WVM0 346 aaKnown RBP18.7■□□□□ 0.58
SNX27-203ENST00000368843 MAN1C1Q9NR34 630 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 LZTS3O60299 673 aaPredicted RBP18.7■□□□□ 0.58
SNX27-203ENST00000368843 EXOSC10Q01780 885 aaKnown RBP18.7■□□□□ 0.58
SNX27-203ENST00000368843 PTK7Q13308 1070 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 NIF3L1Q9GZT8 377 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 STN1Q9H668 368 aaKnown RBP18.7■□□□□ 0.58
SNX27-203ENST00000368843 DGKIO75912 1065 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 IMPDH2P12268 514 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 KLK7P49862 253 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 GRIN1Q05586 938 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 STX3Q13277 289 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 NSMCE4AQ9NXX6 385 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 M0QYT0 321 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 CLASP2O75122 1294 aaKnown RBP18.7■□□□□ 0.58
SNX27-203ENST00000368843 AVPR1AP37288 418 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 DEFB128Q7Z7B8 93 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 FBXO16Q8IX29 292 aaPredicted RBP18.7■□□□□ 0.58
SNX27-203ENST00000368843 STOML1Q9UBI4 398 aa18.7■□□□□ 0.58
SNX27-203ENST00000368843 NPEPPSP55786 919 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 HORMAD1Q86X24 394 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 CHP1Q99653 195 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 LRRC1Q9BTT6 524 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 SMARCAL1Q9NZC9 954 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 F5H5T6 163 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 SLC26A4O43511 780 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 ADCY3O60266 1144 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 HIST2H2ACQ16777 129 aaPredicted RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 HIST2H2AA3Q6FI13 130 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 CLEC4FQ8N1N0 589 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 SPATA4Q8NEY3 305 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 FBXO32Q969P5 355 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 PLEKHA8Q96JA3 519 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 PAK5Q9P286 719 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 AKAP10O43572 662 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 AP1G2O75843 785 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 NTSR2O95665 410 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 RAD23BP54727 409 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 PWP1Q13610 501 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 TTC39BQ5VTQ0 682 aaPredicted RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 ALDH8A1Q9H2A2 487 aaPredicted RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 MAN1A2O60476 641 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 H2AFYO75367 372 aaKnown RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 EPHX2P34913 555 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 PGM1P36871 562 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 MAPRE1Q15691 268 aaKnown RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNX27-203ENST00000368843 TBX20Q9UMR3 447 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 GUCY1A3Q02108 690 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 ERAP2Q6P179 960 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 AGBL3Q8NEM8 1001 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 PSMC3IPQ9P2W1 217 aaPredicted RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 CHORDC1Q9UHD1 332 aaPredicted RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 POLR1AO95602 1720 aaPredicted RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 SRP72O76094 671 aaKnown RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 CHGBP05060 677 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 RFX3P48380 749 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 SERPINB9P50453 376 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 TBL3Q12788 808 aaKnown RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 TRIM28Q13263 835 aaKnown RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 C4orf33Q8N1A6 199 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 CCDC33Q8N5R6 958 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 ZCCHC17Q9NP64 241 aaKnown RBP18.69■□□□□ 0.58
SNX27-203ENST00000368843 OLFML3Q9NRN5 406 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 AGPAT5Q9NUQ2 364 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNX27-203ENST00000368843 SLC39A10Q9ULF5 831 aa18.69■□□□□ 0.58
SNX27-203ENST00000368843 MAP3K13O43283 966 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 PMPCBO75439 489 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 B3GAT3O94766 335 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 PTK6Q13882 451 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 GJB7Q6PEY0 223 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 BLOC1S5Q8TDH9 187 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 TP53BP2Q13625 1128 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 BTNL9Q6UXG8 535 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 FAM71DQ8N9W8 422 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 RSAD1Q9HA92 442 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 NMRK2Q9NPI5 230 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 WBP4O75554 376 aaKnown RBP18.68■□□□□ 0.58
SNX27-203ENST00000368843 FMR1Q06787 632 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNX27-203ENST00000368843 RABL6Q3YEC7 729 aaPredicted RBP18.68■□□□□ 0.58
SNX27-203ENST00000368843 WWOXQ9NZC7 414 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 ZNF711Q9Y462 761 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 RNF17Q9BXT8 1623 aaKnown RBP18.68■□□□□ 0.58
SNX27-203ENST00000368843 UBXN8O00124 270 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 ENDOD1O94919 500 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 MLNP12872 115 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 SLC9A1P19634 815 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 C3orf62Q6ZUJ4 267 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 IFNEQ86WN2 208 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 C10orf53Q8N6V4 93 aa18.68■□□□□ 0.58
SNX27-203ENST00000368843 RPRD1AQ96P16 312 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms