RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 VAV2P52735 878 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 CYP27A1Q02318 531 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 BTG3Q14201 252 aaPredicted RBP13.1□□□□□ -0.31
TUBE1-202ENST00000368662 ZNF662Q6ZS27 426 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 TNS4Q8IZW8 715 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 CRYBG2Q8N1P7 616 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 HASPINQ8TF76 798 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 TWNKQ96RR1 684 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 ZNF518BQ9C0D4 1074 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 PCDHA13Q9Y5I0 950 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 SLC4A7Q9Y6M7 1214 aa13.1□□□□□ -0.31
TUBE1-202ENST00000368662 ITGB1P05556 798 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 MAGEA1P43355 309 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 EPHB4P54760 987 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 BCAR1P56945 870 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 SPOUT1Q5T280 376 aaKnown RBP13.09□□□□□ -0.31
TUBE1-202ENST00000368662 FAM117BQ6P1L5 589 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 THEM5Q8N1Q8 247 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 OLIG1Q8TAK6 271 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 TSGA10Q9BZW7 698 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 CWH43Q9H720 699 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 DDX43Q9NXZ2 648 aaKnown RBP13.09□□□□□ -0.31
TUBE1-202ENST00000368662 INTUQ9ULD6 942 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 NENFQ9UMX5 172 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 REXO2Q9Y3B8 237 aaKnown RBP13.09□□□□□ -0.31
TUBE1-202ENST00000368662 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 RTN2O75298 545 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 CYP1A1P04798 512 aaPredicted RBP13.09□□□□□ -0.31
TUBE1-202ENST00000368662 LAG3P18627 525 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 IGFBP6P24592 240 aaPredicted RBP13.09□□□□□ -0.31
TUBE1-202ENST00000368662 BRD2P25440 801 aaKnown RBP13.09□□□□□ -0.31
TUBE1-202ENST00000368662 HTRA4P83105 476 aaPredicted RBP13.09□□□□□ -0.31
TUBE1-202ENST00000368662 KIF5AQ12840 1032 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 CNGA2Q16280 664 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 OVOS1Q6IE37 1185 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 ACBD6Q9BR61 282 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 ZBED2Q9BTP6 218 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 CDH9Q9ULB4 789 aa13.09□□□□□ -0.31
TUBE1-202ENST00000368662 KRT86O43790 486 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 CAPN15O75808 1086 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 PDGFRBP09619 1106 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 LMO2P25791 158 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
TUBE1-202ENST00000368662 CLEC16AQ2KHT3 1053 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 ACOT1Q86TX2 421 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 TMEM35BQ8NCS4 154 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 TFAP2BQ92481 460 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 PPP1R13BQ96KQ4 1090 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 ZNF558Q96NG5 402 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 ISCUQ9H1K1 167 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 LHX5Q9H2C1 402 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 AAASQ9NRG9 546 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 MARCH5Q9NX47 278 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 TRMT1Q9NXH9 659 aaKnown RBP13.08□□□□□ -0.32
TUBE1-202ENST00000368662 CXXC1Q9P0U4 656 aaPredicted RBP13.08□□□□□ -0.32
TUBE1-202ENST00000368662 STK39Q9UEW8 545 aa13.08□□□□□ -0.32
TUBE1-202ENST00000368662 F8W810 466 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 I3L4J1 428 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 O00370 1275 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 PJA2O43164 708 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 H2AFZP0C0S5 128 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 UNGP13051 313 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 NSFP46459 744 aaKnown RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 CENPCQ03188 943 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 ORC1Q13415 861 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 ARHGAP17Q68EM7 881 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 FUT10Q6P4F1 479 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 KCNT2Q6UVM3 1135 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 LCLAT1Q6UWP7 414 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 H2AFVQ71UI9 128 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 TMCO2Q7Z6W1 182 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 OSTM1Q86WC4 334 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 PALB2Q86YC2 1186 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 B3GALNT2Q8NCR0 500 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 PCDHB18PQ96TA0 734 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 RAD9AQ99638 391 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 OXCT2Q9BYC2 517 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 TIMM13Q9Y5L4 95 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 COL4A6Q14031 1691 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 ANKRD62A6NC57 917 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 OAZ2O95190 189 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 CALCAP01258 141 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 ATP2A2P16615 1042 aaKnown RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 PTPN1P18031 435 aaKnown RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 CDH5P33151 784 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 PPM1AP35813 382 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 MAPRE1Q15691 268 aaKnown RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 ACAD10Q6JQN1 1059 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 HERC6Q8IVU3 1022 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 REXO1L1PQ8IX06 675 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 CTNNBL1Q8WYA6 563 aaPredicted RBP13.07□□□□□ -0.32
TUBE1-202ENST00000368662 CYFIP2Q96F07 1278 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 TRIM11Q96F44 468 aa13.07□□□□□ -0.32
TUBE1-202ENST00000368662 SYT15Q9BQS2 421 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms