RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 IFT88Q13099 833 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 BTG3Q14201 252 aaPredicted RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 CTXN3Q4LDR2 81 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 CD4P01730 458 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 AKAP5P24588 427 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 LRRC63Q05C16 580 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 FNDC3BQ53EP0 1204 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ALS2CLQ60I27 953 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 C16orf59Q7L2K0 433 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 RSPH1Q8WYR4 309 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 PBKQ96KB5 322 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 FAM20AQ96MK3 541 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 SLITRK1Q96PX8 696 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 SPATA16Q9BXB7 569 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 FAM96AQ9H5X1 160 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 SLC38A7Q9NVC3 462 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 SETD4Q9NVD3 440 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 RGS12O14924 1447 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ARHGAP31Q2M1Z3 1444 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 KDM6AO15550 1401 aaPredicted RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 KRT14P02533 472 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 SLFN14P0C7P3 912 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 PCNAP12004 261 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 DARSP14868 501 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ITGAXP20702 1163 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ALFQ53S48 1182 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 TBC1D1Q86TI0 1168 aaPredicted RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 HPDLQ96IR7 371 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 POLLQ9UGP5 575 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 GTF2A1LQ9UNN4 478 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 NOVA2Q9UNW9 492 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 NPC1L1Q9UHC9 1359 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 C5orf58C9J3I9 102 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 H7C4K7 107 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 CTNND1O60716 968 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 AMHP03971 560 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 RALBP11234 206 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 SLC16A1P53985 500 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 EFTUD2Q15029 972 aaKnown RBP eCLIP7.38□□□□□ -1.233e-6■■■■■ 27.6
SPTA1-201ENST00000368147 EPC2Q52LR7 807 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 TDRD7Q8NHU6 1098 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 TRIM62Q9BVG3 475 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 MAPK13O15264 365 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 HIST1H2AGP0C0S8 130 aaPredicted RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 HIST1H2ADP20671 130 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 CLCN3P51790 818 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 NCALDP61601 193 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 PSMC6P62333 389 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 PDIA2Q13087 525 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ZNF177Q13360 481 aaPredicted RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 CCDC142Q17RM4 750 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 RESP18Q5W5W9 173 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ALKBH5Q6P6C2 394 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ZBED8Q8IZ13 594 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 MPP4Q96JB8 637 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 HIST1H2AHQ96KK5 128 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 DEPDC7Q96QD5 511 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 HIST1H2AJQ99878 128 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 H2AFJQ9BTM1 129 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 DBR1Q9UK59 544 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 PCDHGB4Q9UN71 923 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 SNX24Q9Y343 169 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 CASZ1Q86V15 1759 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 ATMINO43313 823 aaPredicted RBP7.37□□□□□ -1.23
SPTA1-201ENST00000368147 APRTP07741 180 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 IFNAR1P17181 557 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 BCAP31P51572 246 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 ARL4CP56559 192 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 ALDH6A1Q02252 535 aaKnown RBP7.37□□□□□ -1.23
SPTA1-201ENST00000368147 PUDPQ08623 228 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 GRAMD1BQ3KR37 738 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 ANKS6Q68DC2 871 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 MIER2Q8N344 545 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 LINC00301Q8NCQ3 95 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 ASAP3Q8TDY4 903 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 LPAR1Q92633 364 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 CCT7Q99832 543 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 TUT1Q9H6E5 874 aaKnown RBP7.37□□□□□ -1.23
SPTA1-201ENST00000368147 HMX1Q9NP08 348 aaPredicted RBP7.37□□□□□ -1.23
SPTA1-201ENST00000368147 MTMR4Q9NYA4 1195 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 NFU1Q9UMS0 254 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 SYNGAP1Q96PV0 1343 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 CAMTA2O94983 1202 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 CDH2P19022 906 aaPredicted RBP7.37□□□□□ -1.23
SPTA1-201ENST00000368147 RARS2Q5T160 578 aaKnown RBP7.37□□□□□ -1.23
SPTA1-201ENST00000368147 ACAD11Q709F0 780 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 SPIRE2Q8WWL2 714 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 MED8Q96G25 268 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.37□□□□□ -1.232e-8■■□□□ 11.5
SPTA1-201ENST00000368147 ECT2Q9H8V3 914 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 CLASP2O75122 1294 aaKnown RBP7.37□□□□□ -1.23
SPTA1-201ENST00000368147 ITGB6P18564 788 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 CCNE1P24864 410 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 AARSP49588 968 aaKnown RBP eCLIP7.37□□□□□ -1.235e-7■□□□□ 11
SPTA1-201ENST00000368147 ARSEP51690 589 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 MCCD1P59942 119 aaPredicted RBP7.37□□□□□ -1.23
SPTA1-201ENST00000368147 EFEMP1Q12805 493 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 KYAT1Q16773 422 aa7.37□□□□□ -1.23
SPTA1-201ENST00000368147 DGKHQ86XP1 1220 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms