RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 KRT4P19013 534 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 TNNI1P19237 187 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 PGM1P36871 562 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 GTF2BQ00403 316 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 DMP1Q13316 513 aaPredicted RBP20.68■□□□□ 0.9
TRIM58-201ENST00000366481 FBXL13Q8NEE6 735 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 ZNF75CPQ92670 426 aaPredicted RBP20.68■□□□□ 0.9
TRIM58-201ENST00000366481 HAUS1Q96CS2 278 aa20.68■□□□□ 0.9
TRIM58-201ENST00000366481 FBXO6Q9NRD1 293 aaPredicted RBP20.68■□□□□ 0.9
TRIM58-201ENST00000366481 NRXN2Q9P2S2 1712 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 A0A1W2PPM1 405 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 IFNB1P01574 187 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 MOGSQ13724 837 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 C10orf82Q8WW14 230 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 SYNCQ9H7C4 482 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 KIAA1586Q9HCI6 787 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 PDK4Q16654 411 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 ARHGEF16Q5VV41 709 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 SWSAP1Q6NVH7 229 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 TRABD2AQ86V40 505 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 CCDC89Q8N998 374 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 RFWD2Q8NHY2 731 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 C7orf43Q8WVR3 580 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 WDR60Q8WVS4 1066 aa20.67■□□□□ 0.9
TRIM58-201ENST00000366481 ZNF184Q99676 751 aaPredicted RBP20.67■□□□□ 0.9
TRIM58-201ENST00000366481 ARFIP2P53365 341 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 CYP1B1Q16678 543 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 C6orf163Q5TEZ5 329 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 IZUMO2Q6UXV1 221 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 OPTNQ96CV9 577 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ZBTB45Q96K62 511 aaPredicted RBP20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ARMCX1Q9P291 453 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 PDP2Q9P2J9 529 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ANKFY1Q9P2R3 1169 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ZNF148Q9UQR1 794 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 SH3BP1Q9Y3L3 701 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 GJA3Q9Y6H8 435 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 LRRC37AA6NMS7 1700 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 C2orf71A6NGG8 1288 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ZWINTO95229 277 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 HSD17B4P51659 736 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 NEK3P51956 506 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 CAV1Q03135 178 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 MTMR2Q13614 643 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 BAATQ14032 418 aaPredicted RBP20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ANKMY2Q8IV38 441 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ZBED8Q8IZ13 594 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 FAM136AQ96C01 138 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 NSL1Q96IY1 281 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 TRIM55Q9BYV6 548 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 GRID1Q9ULK0 1009 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ATAD5Q96QE3 1844 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 GSC2O15499 205 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ZNF862O60290 1169 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 PYGBP11216 843 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 RALAP11233 206 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ADRA1DP25100 572 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 SERPINB3P29508 390 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 PGM5Q15124 567 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ZNF394Q53GI3 561 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 SLC45A4Q5BKX6 768 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 TMEM63BQ5T3F8 832 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 ANKS1BQ7Z6G8 1248 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 FAM160B2Q86V87 743 aa20.66■□□□□ 0.9
TRIM58-201ENST00000366481 CHCHD3Q9NX63 227 aaKnown RBP20.66■□□□□ 0.9
TRIM58-201ENST00000366481 SEPT9Q9UHD8 586 aaPredicted RBP20.66■□□□□ 0.9
TRIM58-201ENST00000366481 TXNDC9O14530 226 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 TP73O15350 636 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 PFDN1O60925 122 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 PTGER2P43116 358 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 SCNN1BP51168 640 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 ZBTB41Q5SVQ8 909 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 PCNX4Q63HM2 1172 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 GTF3C4Q9UKN8 822 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 KRT10P13645 584 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 TCF4P15884 667 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 NOP14P78316 857 aaKnown RBP20.65■□□□□ 0.9
TRIM58-201ENST00000366481 CEP128Q6ZU80 1094 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 TRIM74Q86UV6 250 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 TRIM73Q86UV7 250 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 TMEM143Q96AN5 459 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 NEU2Q9Y3R4 380 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 NPM3O75607 178 aaKnown RBP20.65■□□□□ 0.9
TRIM58-201ENST00000366481 DEUP1Q05D60 604 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 MTERF2Q49AM1 385 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 DDX1Q92499 740 aaKnown RBP20.65■□□□□ 0.9
TRIM58-201ENST00000366481 ZNF668Q96K58 619 aaPredicted RBP20.65■□□□□ 0.9
TRIM58-201ENST00000366481 LMCD1Q9NZU5 365 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 LGALS13Q9UHV8 139 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 SMG5Q9UPR3 1016 aaKnown RBP20.65■□□□□ 0.9
TRIM58-201ENST00000366481 UBIAD1Q9Y5Z9 338 aa20.65■□□□□ 0.9
TRIM58-201ENST00000366481 GRIN3BO60391 1043 aa20.64■□□□□ 0.89
TRIM58-201ENST00000366481 ZSCAN5DPP0CG00 497 aa20.64■□□□□ 0.89
TRIM58-201ENST00000366481 MAN1A1P33908 653 aa20.64■□□□□ 0.89
TRIM58-201ENST00000366481 PSMC5P62195 406 aa20.64■□□□□ 0.89
TRIM58-201ENST00000366481 RHBDF2Q6PJF5 856 aa20.64■□□□□ 0.89
TRIM58-201ENST00000366481 ZNF516Q92618 1163 aa20.64■□□□□ 0.89
TRIM58-201ENST00000366481 CENPKQ9BS16 269 aa20.64■□□□□ 0.89
TRIM58-201ENST00000366481 DMAP1Q9NPF5 467 aaPredicted RBP20.64■□□□□ 0.89
TRIM58-201ENST00000366481 RHBDL2Q9NX52 303 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms