RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PP632Q6XCG6 107 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 OTOP1Q7RTM1 612 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 OVCH1Q7RTY7 1134 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 KIAA1958Q8N8K9 716 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 Q8NA96 180 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 GADD45GIP1Q8TAE8 222 aaPredicted RBP0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 LMO3Q8TAP4 145 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 RSAD2Q8WXG1 361 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 PHF21BQ96EK2 531 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 DUX3Q96PT4 197 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 FYTTD1Q96QD9 318 aaKnown RBP0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 NODALQ96S42 347 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 UHRF1Q96T88 793 aaPredicted RBP0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 CDC6Q99741 560 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 FDXACB1Q9BRP7 624 aaPredicted RBP0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 EFHD1Q9BUP0 239 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 CDT1Q9H211 546 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 METTL5Q9NRN9 209 aaKnown RBP0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 DECR2Q9NUI1 292 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 NCKIPSDQ9NZQ3 722 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 SH2B3Q9UQQ2 575 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 CDYLQ9Y232 598 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 COQ6Q9Y2Z9 468 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 PCDHA9Q9Y5H5 950 aa0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 UTP18Q9Y5J1 556 aaKnown RBP eCLIP0.48□□□□□ -2.33
RNU6-54P-201ENST00000365563 SCN5AQ14524 2016 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 RPTORQ8N122 1335 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 CDHR4A6H8M9 788 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 SMAD7O15105 426 aaKnown RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 CTIFO43310 598 aaKnown RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 EXTL3O43909 919 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 ZC3H11AO75152 810 aaKnown RBP eCLIP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 PRSS23O95084 383 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 PAK4O96013 591 aaPredicted RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 IGLV2-11P01706 119 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 APOHP02749 345 aaPredicted RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 PFKMP08237 780 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 ZBTB48P10074 688 aaPredicted RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 CTSAP10619 480 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 FCER1AP12319 257 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 JUPP14923 745 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 CD40P25942 277 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 ECHS1P30084 290 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 ARRB2P32121 409 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 THBS4P35443 961 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 RANGAP1P46060 587 aaPredicted RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 SCNN1BP51168 640 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 HNRNPA3P51991 378 aaKnown RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 ATP12AP54707 1039 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 DLX5P56178 289 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 PPATQ06203 517 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 PPARAQ07869 468 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 SLFN5Q08AF3 891 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 ACSM2AQ08AH3 577 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 BFSP2Q13515 415 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 PDCD1Q15116 288 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 SLC9C1Q4G0N8 1177 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 C4orf46Q504U0 113 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 FCRL6Q6DN72 434 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 OTUD7BQ6GQQ9 843 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 SPINK14Q6IE38 97 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 FAM198BQ6UWH4 519 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 UNQ6494/PRO21346Q6UXR6 183 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 ZNF793Q6ZN11 406 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 RFX8Q6ZV50 586 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 TRAPPC11Q7Z392 1133 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 P2RY8Q86VZ1 359 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 COL23A1Q86Y22 540 aaPredicted RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 DCUN1D3Q8IWE4 304 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 TRMT2AQ8IZ69 625 aaKnown RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 TMEM87AQ8NBN3 555 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 NLGN4YQ8NFZ3 816 aaPredicted RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 OR7D4Q8NG98 312 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 KLHDC4Q8TBB5 520 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 TBC1D15Q8TC07 691 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 OSBPL9Q96SU4 736 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 FSD1LQ9BXM9 530 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 ACTRT3Q9BYD9 372 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 WNT8AQ9H1J5 351 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 RETREG1Q9H6L5 497 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 BCO1Q9HAY6 547 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 DUSP22Q9NRW4 184 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 LANCL2Q9NS86 450 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 FBXO34Q9NWN3 711 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 HIF1ANQ9NWT6 349 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 IGSF9Q9P2J2 1179 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 DDX41Q9UJV9 622 aaKnown RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 MAFFQ9ULX9 164 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 MYO6Q9UM54 1294 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 ZSCAN21Q9Y5A6 473 aaPredicted RBP0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 GPR98Q8WXG9 6306 aa0.47□□□□□ -2.33
RNU6-54P-201ENST00000365563 SPATA31A3Q5VYP0 1347 aa0.46□□□□□ -2.34
RNU6-54P-201ENST00000365563 TRBV23-1A0A0A0MS06 115 aa0.46□□□□□ -2.34
RNU6-54P-201ENST00000365563 PLSCR5A0PG75 271 aa0.46□□□□□ -2.34
RNU6-54P-201ENST00000365563 A8MU10 97 aa0.46□□□□□ -2.34
RNU6-54P-201ENST00000365563 BTBD19C9JJ37 291 aa0.46□□□□□ -2.34
RNU6-54P-201ENST00000365563 F5H697 171 aa0.46□□□□□ -2.34
RNU6-54P-201ENST00000365563 PODXLO00592 558 aa0.46□□□□□ -2.34
RNU6-54P-201ENST00000365563 ADCY6O43306 1168 aa0.46□□□□□ -2.34
RNU6-54P-201ENST00000365563 BUB3O43684 328 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms