RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 POC1B-GALNT4F8VUJ3 575 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 SMIM22K7EJ46 135 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 ALPLP05186 524 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 TCF15Q12870 199 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 LRRC41Q15345 812 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 TBC1D25Q3MII6 688 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 DALRD3Q5D0E6 543 aaKnown RBP3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 TOR2AQ5JU69 321 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 SFRP4Q6FHJ7 346 aaPredicted RBP3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 ZNF813Q6ZN06 617 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 NPM2Q86SE8 214 aaKnown RBP3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 CNGA4Q8IV77 575 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 GALNT4Q8N4A0 578 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 SLC17A8Q8NDX2 589 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 OR2I1PQ8NGU4 316 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 RP9Q8TA86 221 aaKnown RBP3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 ZC3H10Q96K80 434 aaKnown RBP3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 SIK2Q9H0K1 926 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 SIDT1Q9NXL6 827 aaKnown RBP3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 DLL3Q9NYJ7 618 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 CALCOCO1Q9P1Z2 691 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 DKK3Q9UBP4 350 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 PCDHGA2Q9Y5H1 932 aa3.04□□□□□ -1.92
RNU6-238P-201ENST00000363313 FNDC1Q4ZHG4 1894 aaPredicted RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 A0A087X0B3 334 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 H0YIZ8 118 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 POLRMTO00411 1230 aaKnown RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 SLC16A3O15427 465 aaKnown RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 BRINP1O60477 761 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 TJP3O95049 919 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 LPOP22079 712 aaPredicted RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 ATP5F1P24539 256 aaPredicted RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 ARHGAP25P42331 645 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 C21orf62-AS1Q17RA5 79 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 TKFCQ3LXA3 575 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 CERKLQ49MI3 558 aaPredicted RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 Q4G0T1 1027 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 C10orf25Q5T742 122 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 MEX3CQ5U5Q3 659 aaKnown RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 LVRNQ6Q4G3 990 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 TRIM72Q6ZMU5 477 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 C18orf65Q6ZTR6 163 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 DDX46Q7L014 1031 aaKnown RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 RSPH3Q86UC2 560 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 RHOT1Q8IXI2 618 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 NRACQ8N912 160 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 PNLDC1Q8NA58 520 aaKnown RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 ZBTB8BQ8NAP8 495 aaPredicted RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 TMIEQ8NEW7 156 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 KLHDC4Q8TBB5 520 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 IFI44Q8TCB0 444 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 TGFBRAP1Q8WUH2 860 aa3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 ZNF277Q9NRM2 450 aaPredicted RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 SAP30BPQ9UHR5 308 aaKnown RBP3.03□□□□□ -1.92
RNU6-238P-201ENST00000363313 CYSRT1A8MQ03 144 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 FCHO1O14526 889 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 USP1O94782 785 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 ITGALP20701 1170 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 IL1R2P27930 398 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 CYP2C19P33261 490 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 GPR3P46089 330 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 NANOS2P60321 138 aaKnown RBP3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 SRSF2Q01130 221 aaKnown RBP3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 LEXMQ3ZCV2 418 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 PCID2Q5JVF3 399 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 SHC4Q6S5L8 630 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 DEF8Q6ZN54 512 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 USP43Q70EL4 1123 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 PARS2Q7L3T8 475 aaKnown RBP3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 MAVSQ7Z434 540 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 RBMXL3Q8N7X1 1067 aaKnown RBP3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 NSUN7Q8NE18 718 aaKnown RBP3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 ACRBPQ8NEB7 543 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 CUL5Q93034 780 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 CTAGE1Q96RT6 745 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 CNPPD1Q9BV87 410 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 FSD1LQ9BXM9 530 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 DUSP22Q9NRW4 184 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 TDP1Q9NUW8 608 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 ETAA1Q9NY74 926 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 SCAF8Q9UPN6 1271 aaKnown RBP3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 DNM3Q9UQ16 869 aa3.02□□□□□ -1.93
RNU6-238P-201ENST00000363313 UBE2Q2LH0YL09 131 aa3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 SMAD6O43541 496 aaKnown RBP3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 ABLIM3O94929 683 aa3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 SBK3P0C264 359 aa3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 CD6P30203 668 aa3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 CYP2C18P33260 490 aa3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 KCNJ5P48544 419 aa3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 TARDBPQ13148 414 aaKnown RBP eCLIP3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 RBMS2Q15434 407 aaKnown RBP3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 FLYWCH1Q4VC44 716 aa3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 RBM20Q5T481 1227 aaKnown RBP3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 KIAA0907Q7Z7F0 614 aaPredicted RBP3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 DAZAP1Q96EP5 407 aaKnown RBP3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 THOC3Q96J01 351 aaKnown RBP3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 TMX3Q96JJ7 454 aa3.01□□□□□ -1.93
RNU6-238P-201ENST00000363313 CAMKK2Q96RR4 588 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms