RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TBX20Q9UMR3 447 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 IGSF9BQ9UPX0 1349 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 A0A087WZ62 844 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 ATP6V0D2Q8N8Y2 350 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 TRAPPC12Q8WVT3 735 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 RFFLQ8WZ73 363 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 FDXACB1Q9BRP7 624 aaPredicted RBP21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 PLA2G12BQ9BX93 195 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 GPATCH2LQ9NWQ4 482 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 EHD2Q9NZN4 543 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 BTG3Q14201 252 aaPredicted RBP21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 DMC1Q14565 340 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 METTL16Q86W50 562 aaKnown RBP21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 IFNEQ86WN2 208 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 DPF2Q92785 391 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 KLF6Q99612 283 aaPredicted RBP21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 MSH4O15457 936 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 FMR1Q06787 632 aaKnown RBP eCLIP21.2■□□□□ 0.987e-6■■□□□ 12.8
CDC42BPB-201ENST00000361246 TMED1Q13445 227 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 ALDH2P05091 517 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 PRMT1Q99873 361 aaKnown RBP21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 C17orf80Q9BSJ5 609 aa21.2■□□□□ 0.98
CDC42BPB-201ENST00000361246 IQGAP3Q86VI3 1631 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 SLC8A1P32418 973 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 CDCA5Q96FF9 252 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 SLC12A8A0AV02 714 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 TGFB2P61812 414 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 RASGRP2Q7LDG7 609 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 DTNAQ9Y4J8 743 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 HES6Q96HZ4 224 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 CDC16Q13042 620 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 PALB2Q86YC2 1186 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 SGF29Q96ES7 293 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 RNASEH1O60930 286 aaKnown RBP21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 POM121L1PQ3SYA9 428 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 SBK1Q52WX2 424 aa21.19■□□□□ 0.98
CDC42BPB-201ENST00000361246 THP07101 528 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 GALCP54803 685 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 KDSRQ06136 332 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 PDIA5Q14554 519 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 C16orf59Q7L2K0 433 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 TXNRD3Q86VQ6 643 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 ZC3H7BQ9UGR2 993 aaKnown RBP21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 CNTNAP4Q9C0A0 1308 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 DCTN3O75935 186 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 ADORA2AP29274 412 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 SLC16A1P53985 500 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 POLE2P56282 527 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 NRBF2Q96F24 287 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 XPNPEP3Q9NQH7 507 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 PXMP2Q9NR77 195 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 STK4Q13043 487 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 KCNT1Q5JUK3 1230 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 PCSK9Q8NBP7 692 aaKnown RBP21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 USP49Q70CQ1 688 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 PATL1Q86TB9 770 aaKnown RBP21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 UNKQ9C0B0 810 aaKnown RBP21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 CBX4O00257 560 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 DDX5P17844 614 aaKnown RBP21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 RAP1GDS1P52306 607 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 TJAP1Q5JTD0 557 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 VPS28Q9UK41 221 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 WDR19Q8NEZ3 1342 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 HMGB1P1B2RPK0 211 aaPredicted RBP21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 ACAT1P24752 427 aaKnown RBP21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 MAP2K2P36507 400 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 LAYNQ6UX15 382 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 STK33Q9BYT3 514 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 FBXO10Q9UK96 956 aa21.18■□□□□ 0.98
CDC42BPB-201ENST00000361246 PDHA1P08559 390 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 SGMS1Q86VZ5 419 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 LCMT1Q9UIC8 334 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 ZNF500O60304 480 aaPredicted RBP21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 ARFIP2P53365 341 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 RBM23Q86U06 439 aaKnown RBP21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 C4orf33Q8N1A6 199 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 ARHGEF26Q96DR7 871 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 TIPINQ9BVW5 301 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 CNTNAP5Q8WYK1 1306 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 PCNAP12004 261 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 ATXN3LQ9H3M9 355 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 CCDC144BQ3MJ40 725 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 FUT11Q495W5 492 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 CHMP1BQ7LBR1 199 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 EDEM1Q92611 657 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 FKBP9O95302 570 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 CYP2C19P33261 490 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 PTPN7P35236 360 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 NCALDP61601 193 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 FAM171A1Q5VUB5 890 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 FOXR1Q6PIV2 292 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 FKBP9P1Q75LS8 142 aa21.17■□□□□ 0.98
CDC42BPB-201ENST00000361246 GPR75-ASB3A0A0A6YYF3 556 aa21.16■□□□□ 0.98
CDC42BPB-201ENST00000361246 PIGHQ14442 188 aaPredicted RBP21.16■□□□□ 0.98
CDC42BPB-201ENST00000361246 TUBB6Q9BUF5 446 aa21.16■□□□□ 0.98
CDC42BPB-201ENST00000361246 P4HA2O15460 535 aa21.16■□□□□ 0.98
CDC42BPB-201ENST00000361246 SERPINI2O75830 405 aa21.16■□□□□ 0.98
CDC42BPB-201ENST00000361246 UCHL3P15374 230 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms