RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 AFF4Q9UHB7 1163 aaKnown RBP20.49■□□□□ 0.87
HLA-DRB1-201ENST00000360004 WEE2P0C1S8 567 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 FAM163BP0C2L3 166 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ATF2P15336 505 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CD58P19256 250 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 LTBRP36941 435 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CDH8P55286 799 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 MRPS5P82675 430 aaKnown RBP20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 KCNC3Q14003 757 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 NFE2Q16621 373 aaPredicted RBP20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TCP11X2Q5H9J9 407 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 INTS6LQ5JSJ4 861 aaKnown RBP20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 LILRA6Q6PI73 481 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TMC5Q6UXY8 1006 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 IRF2BP1Q8IU81 584 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 KBTBD7Q8WVZ9 684 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 BPIFA3Q9BQP9 254 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CYP3A43Q9HB55 503 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ABI2Q9NYB9 513 aaPredicted RBP20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TAB2Q9NYJ8 693 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 GCNT4Q9P109 453 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CDH9Q9ULB4 789 aa20.48■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CCDC195A0A1B0GUA6 201 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 XYLBO75191 536 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ZMYND10O75800 440 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ABLIM3O94929 683 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CDR1P51861 262 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PSMC1P62191 440 aaKnown RBP20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 YWHAEP62258 255 aaKnown RBP20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ITIH3Q06033 890 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SMARCB1Q12824 385 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 MAPRE1Q15691 268 aaKnown RBP20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PUS10Q3MIT2 529 aaKnown RBP20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 LEXMQ3ZCV2 418 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 VWA3BQ502W6 1294 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 GBP6Q6ZN66 633 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SPATA2LQ8IUW3 424 aaPredicted RBP20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ELMOD1Q8N336 334 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TNIP3Q96KP6 325 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 RIPOR3Q96MK2 946 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 RTP3Q9BQQ7 232 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 APOBEC3GQ9HC16 384 aaKnown RBP20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ZDHHC7Q9NXF8 308 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 MAFFQ9ULX9 164 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 COQ4Q9Y3A0 265 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PCDHB5Q9Y5E4 795 aa20.47■□□□□ 0.87
HLA-DRB1-201ENST00000360004 GOLGA6L19H0YKK7 550 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 GABRDO14764 452 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PMM2O15305 246 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 RFPL2O75678 378 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CAVIN2O95810 425 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 LMO2P25791 158 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ASPAP45381 313 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PLD1Q13393 1074 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SMAD4Q13485 552 aaKnown RBP20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 UVSSAQ2YD98 709 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 MGAT5BQ3V5L5 792 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ATAT1Q5SQI0 421 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PTCRAQ6ISU1 281 aaPredicted RBP20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 C4orf50Q6ZRC1 276 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 PPM1KQ8N3J5 372 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TTC39CQ8N584 583 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 EHBP1Q8NDI1 1231 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 FAM200AQ8TCP9 573 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SPPL2BQ8TCT7 592 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 C2orf15Q8WU43 125 aaKnown RBP20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 ATXN2LQ8WWM7 1075 aaKnown RBP20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SMG7Q92540 1137 aaKnown RBP20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 SEPT5Q99719 369 aaPredicted RBP20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 CRACR2AQ9BSW2 395 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 INTS2Q9H0H0 1204 aaKnown RBP20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 NDST4Q9H3R1 872 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 GTF3C4Q9UKN8 822 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 TSC2P49815 1807 aa20.46■□□□□ 0.87
HLA-DRB1-201ENST00000360004 MTMR11A4FU01 709 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CCL16O15467 120 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 HCRTO43612 131 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 LRRN2O75325 713 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 HNRNPA1P09651 372 aaKnown RBP eCLIP20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 TBXAS1P24557 533 aaPredicted RBP20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ALDH1A3P47895 512 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CYP27A1Q02318 531 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 DUSP4Q13115 394 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 TAF12Q16514 161 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 EXOC3L4Q17RC7 722 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 MDH1BQ5I0G3 518 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 FKBP15Q5T1M5 1219 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 CDKAL1Q5VV42 579 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 SYCE2Q6PIF2 218 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 LIMS2Q7Z4I7 341 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 TCEAL8Q8IYN2 117 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 ATAD1Q8NBU5 361 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 TATDN2Q93075 761 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 MSLNLQ96KJ4 702 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 MED10Q9BTT4 135 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 FUCA2Q9BTY2 467 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 VPS16Q9H269 839 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 SLC27A5Q9Y2P5 690 aa20.45■□□□□ 0.86
HLA-DRB1-201ENST00000360004 INSL5Q9Y5Q6 135 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms