RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 STOML1Q9UBI4 398 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SHOX2O60902 331 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 CHGBP05060 677 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 FYNP06241 537 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 CHRNA5P30532 468 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 EPHB3P54753 998 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 NPEPPSP55786 919 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SLC7A5Q01650 507 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 EXOSC10Q01780 885 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 HLFQ16534 295 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 EFHC1Q5JVL4 640 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 LMBRD2Q68DH5 695 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SLC25A41Q8N5S1 370 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 TC2NQ8N9U0 490 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ZC3H7BQ9UGR2 993 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 HPSEQ9Y251 543 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 TRIM49BA6NDI0 452 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 GTF2E2P29084 291 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 KCNK10P57789 538 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 SMAD1Q15797 465 aaKnown RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 AASDHQ4L235 1098 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-202ENST00000356435 GNASQ5JWF2 1037 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PACS2Q86VP3 889 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 PLD3Q8IV08 490 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 TMEM143Q96AN5 459 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ARHGEF26Q96DR7 871 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 ANKRD27Q96NW4 1050 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 AGPAT1Q99943 283 aa5.78□□□□□ -1.48
PTPRD-202ENST00000356435 EIF3HO15372 352 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 LZTS3O60299 673 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 DEAF1O75398 565 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SPAG6O75602 509 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 RUNX1T1Q06455 604 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 NCOA4Q13772 614 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CCDC142Q17RM4 750 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF746Q6NUN9 644 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 MAGEC3Q8TD91 643 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CELF1Q92879 486 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 H3BQF6 201 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 AVPR1AP37288 418 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 POLE2P56282 527 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SESN2P58004 480 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 TBL3Q12788 808 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 PCSK7Q16549 785 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 COBLL1Q53SF7 1204 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 DCAF6Q58WW2 860 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 PLEKHH3Q7Z736 793 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SHCBP1Q8NEM2 672 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CYFIP2Q96F07 1278 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 PDS5AQ29RF7 1337 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 C2orf81A6NN90 581 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 FAM200BP0CF97 657 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 HPGDP15428 266 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 PDGFRAP16234 1089 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CHI3L1P36222 383 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 OXCT1P55809 520 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 POU4F1Q01851 419 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 UBE3AQ05086 875 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 PIGHQ14442 188 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 USP10Q14694 798 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CRYMQ14894 314 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CCDC137Q6PK04 289 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ADCK1Q86TW2 530 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ANKRD13AQ8IZ07 590 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ANKRD49Q8WVL7 239 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 FAM161BQ96MY7 647 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CAMKK2Q96RR4 588 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 BRD8Q9H0E9 1235 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 UBQLN1Q9UMX0 589 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 IGSF9BQ9UPX0 1349 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 C2CD2LO14523 706 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 PGK2P07205 417 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 GMPSP49915 693 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 TRIP4Q15650 581 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 NAPEPLDQ6IQ20 393 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 DDX42Q86XP3 938 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SLC44A5Q8NCS7 719 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SPIRE2Q8WWL2 714 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 MCEEQ96PE7 176 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 DYRK1BQ9Y463 629 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 DAGLAQ9Y4D2 1042 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 PNPLA7Q6ZV29 1317 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 PIK3C2BO00750 1634 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CLTCQ00610 1675 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 VWA5AO00534 786 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 TBX3O15119 743 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SOAT2O75908 522 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SUPT20HL2P0C7V6 817 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ATP1A3P13637 1013 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 AKR1B1P15121 316 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 RPL10AP62906 217 aaKnown RBP5.77□□□□□ -1.49
PTPRD-202ENST00000356435 HHIPL2Q6UWX4 724 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 NEDD1Q8NHV4 660 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SLC13A1Q9BZW2 595 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 SYBUQ9NX95 663 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 USE1Q9NZ43 259 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 NYAP2Q9P242 653 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 ADGRA2Q96PE1 1338 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 A0A0G2JLW4 131 aa5.77□□□□□ -1.49
PTPRD-202ENST00000356435 CARNS1A5YM72 827 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms