RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 CHRNB2P17787 502 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 PAX3P23760 479 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 BRD2P25440 801 aaKnown RBP25.61■■□□□ 1.69
CHKA-202ENST00000356135 DNTTIP2Q5QJE6 756 aaKnown RBP25.61■■□□□ 1.69
CHKA-202ENST00000356135 KIAA0319Q5VV43 1072 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 CEP57Q86XR8 500 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 C12orf29Q8N999 325 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 IGSF21Q96ID5 467 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 CCDC42Q96M95 316 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 HEXIM2Q96MH2 286 aaKnown RBP25.61■■□□□ 1.69
CHKA-202ENST00000356135 AGPAT1Q99943 283 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 DESI2Q9BSY9 194 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 SYT11Q9BT88 431 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.61■■□□□ 1.69
CHKA-202ENST00000356135 TRAPPC3O43617 180 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 CYP11A1P05108 521 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 CD19P15391 556 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 LAG3P18627 525 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 PDE6CP51160 858 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 MAPK8IP2Q13387 824 aaPredicted RBP25.61■■□□□ 1.69
CHKA-202ENST00000356135 PTPN14Q15678 1187 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 CCDC142Q17RM4 750 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 ASTE1Q2TB18 679 aaPredicted RBP25.61■■□□□ 1.69
CHKA-202ENST00000356135 FMNL3Q8IVF7 1028 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 SLC39A11Q8N1S5 342 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 RTP3Q9BQQ7 232 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 VN1R3Q9BXE9 311 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 ADAMTS1Q9UHI8 967 aa25.61■■□□□ 1.69
CHKA-202ENST00000356135 BZW2Q9Y6E2 419 aaKnown RBP25.61■■□□□ 1.69
CHKA-202ENST00000356135 TNRC18O15417 2968 aaPredicted RBP25.61■■□□□ 1.69
CHKA-202ENST00000356135 KIF2AO00139 706 aaPredicted RBP25.6■■□□□ 1.69
CHKA-202ENST00000356135 THAP12O43422 761 aa25.6■■□□□ 1.69
CHKA-202ENST00000356135 PSMC1P62191 440 aaKnown RBP25.6■■□□□ 1.69
CHKA-202ENST00000356135 GFPT1Q06210 699 aaPredicted RBP25.6■■□□□ 1.69
CHKA-202ENST00000356135 UNC93AQ86WB7 457 aa25.6■■□□□ 1.69
CHKA-202ENST00000356135 GLYCTKQ8IVS8 523 aa25.6■■□□□ 1.69
CHKA-202ENST00000356135 CCDC170Q8IYT3 715 aa25.6■■□□□ 1.69
CHKA-202ENST00000356135 TMEM86AQ8N2M4 240 aa25.6■■□□□ 1.69
CHKA-202ENST00000356135 TTC39CQ8N584 583 aa25.6■■□□□ 1.69
CHKA-202ENST00000356135 LNX1Q8TBB1 728 aaPredicted RBP25.6■■□□□ 1.69
CHKA-202ENST00000356135 SP7Q8TDD2 431 aaPredicted RBP25.6■■□□□ 1.69
CHKA-202ENST00000356135 ZNF606Q8WXB4 792 aa25.6■■□□□ 1.69
CHKA-202ENST00000356135 DEF6Q9H4E7 631 aa25.6■■□□□ 1.69
CHKA-202ENST00000356135 SF3B1O75533 1304 aaKnown RBP eCLIP25.6■■□□□ 1.698e-6■■■■■ 107
CHKA-202ENST00000356135 TNNT1P13805 278 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 BPIFB4P59827 614 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 METTL23Q86XA0 190 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 PALB2Q86YC2 1186 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 PCDHB18PQ96TA0 734 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 FAM124BQ9H5Z6 455 aaPredicted RBP25.59■■□□□ 1.69
CHKA-202ENST00000356135 EPN1Q9Y6I3 576 aaPredicted RBP25.59■■□□□ 1.69
CHKA-202ENST00000356135 A0A087X0T9 212 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 SSU72P8A0A1W2PR75 194 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 DDX3XO00571 662 aaKnown RBP eCLIP25.59■■□□□ 1.696e-22■■■■□ 26.3
CHKA-202ENST00000356135 ARHGEF15O94989 841 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 NDUFA10O95299 355 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 PAEPP09466 180 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 FAM163BP0C2L3 166 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 FAM228BP0C875 321 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 TNFAIP3P21580 790 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 LHX1P48742 406 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 KIF11P52732 1056 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 FMO1Q01740 532 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 CDR2Q01850 454 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 OVOS1Q6IE37 1185 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 SPRED2Q7Z698 418 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 DNAAF5Q86Y56 855 aa25.59■■□□□ 1.69
CHKA-202ENST00000356135 SEPT11Q9NVA2 429 aaKnown RBP25.59■■□□□ 1.69
CHKA-202ENST00000356135 AKR1B10O60218 316 aa25.58■■□□□ 1.69
CHKA-202ENST00000356135 EFEMP2O95967 443 aa25.58■■□□□ 1.69
CHKA-202ENST00000356135 TUBB4AP04350 444 aa25.58■■□□□ 1.69
CHKA-202ENST00000356135 TYMPP19971 482 aa25.58■■□□□ 1.69
CHKA-202ENST00000356135 TMEM209Q96SK2 561 aa25.58■■□□□ 1.69
CHKA-202ENST00000356135 FAM49BQ9NUQ9 324 aa25.58■■□□□ 1.69
CHKA-202ENST00000356135 DSEQ9UL01 958 aa25.58■■□□□ 1.69
CHKA-202ENST00000356135 ZNF263O14978 683 aa25.57■■□□□ 1.68
CHKA-202ENST00000356135 FGFR3P22607 806 aa25.57■■□□□ 1.68
CHKA-202ENST00000356135 CYLC1P35663 651 aaPredicted RBP25.57■■□□□ 1.68
CHKA-202ENST00000356135 CYP27A1Q02318 531 aa25.57■■□□□ 1.68
CHKA-202ENST00000356135 YWHAHQ04917 246 aaPredicted RBP25.57■■□□□ 1.68
CHKA-202ENST00000356135 RTP2Q5QGT7 225 aa25.57■■□□□ 1.68
CHKA-202ENST00000356135 VARS2Q5ST30 1063 aaKnown RBP25.57■■□□□ 1.68
CHKA-202ENST00000356135 CRYBG2Q8N1P7 616 aa25.57■■□□□ 1.68
CHKA-202ENST00000356135 CLP1Q92989 425 aaKnown RBP25.57■■□□□ 1.68
CHKA-202ENST00000356135 SPG21Q9NZD8 308 aa25.57■■□□□ 1.68
CHKA-202ENST00000356135 PASD1Q8IV76 773 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 ACRBPQ8NEB7 543 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 OR10T2Q8NGX3 314 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 SLC30A5Q8TAD4 765 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 TMEM169Q96HH4 297 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 RANBP2P49792 3224 aaKnown RBP25.56■■□□□ 1.68
CHKA-202ENST00000356135 KIAA1671Q9BY89 1806 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 TSC2P49815 1807 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 LINC01553A4QN01 128 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 SYN3O14994 580 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 VDRP11473 427 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 PTPN1P18031 435 aaKnown RBP25.56■■□□□ 1.68
CHKA-202ENST00000356135 RGS19P49795 217 aa25.56■■□□□ 1.68
CHKA-202ENST00000356135 PPP1R26Q5T8A7 1209 aaPredicted RBP25.56■■□□□ 1.68
CHKA-202ENST00000356135 CRTAC1Q9NQ79 661 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms