RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CCDC80Q76M96 950 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 REEP2Q9BRK0 252 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 TBKBP1A7MCY6 615 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 TBX3O15119 743 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 RBP3P10745 1247 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 STIP1P31948 543 aaKnown RBP13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 ST13P50502 369 aaKnown RBP13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 KYAT1Q16773 422 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 THEM5Q8N1Q8 247 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 FBXO25Q8TCJ0 367 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 RMND5BQ96G75 393 aaPredicted RBP13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
SYNCRIP-201ENST00000355238 A0A087X0T9 212 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 SLCO1B7G3V0H7 640 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 TNPO2O14787 897 aaKnown RBP13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 FAM228BP0C875 321 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 AKR1B1P15121 316 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 PECAM1P16284 738 aaPredicted RBP13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 AQP5P55064 265 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 NME3Q13232 169 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 SYCP2LQ5T4T6 812 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 HEATR4Q86WZ0 1026 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 GDPD5Q8WTR4 605 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 TMEM79Q9BSE2 394 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 CYP39A1Q9NYL5 469 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 DUSP10Q9Y6W6 482 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 RNF103O00237 685 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 RGS5O15539 181 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 CST8O60676 142 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 PDGFRAP16234 1089 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 C1orf131Q8NDD1 294 aaKnown RBP13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 NDFIP2Q9NV92 336 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 DDX18Q9NVP1 670 aaKnown RBP13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 HPSEQ9Y251 543 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 DNALI1O14645 258 aaPredicted RBP13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 GRK2P25098 689 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 NFX1Q12986 1120 aaKnown RBP13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 QRICH1Q2TAL8 776 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 TAF2Q6P1X5 1199 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZCCHC7Q8N3Z6 543 aaKnown RBP13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 RMDN3Q96TC7 470 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 SHCBP1LQ9BZQ2 653 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 FAM217BQ9NTX9 383 aaPredicted RBP13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 TPI1P60174 286 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 COBLL1Q53SF7 1204 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 CATSPER4Q7RTX7 472 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 CNKSR1Q969H4 720 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 RNPEPL1Q9HAU8 725 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 IL1RL2Q9HB29 575 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 DISP1Q96F81 1524 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 C5orf58C9J3I9 102 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 CNTFP26441 200 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 TRIM25Q14258 630 aaKnown RBP13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZFP1Q6P2D0 407 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 CCNJLQ8IV13 435 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 FEZF2Q8TBJ5 459 aa13.24□□□□□ -0.29
SYNCRIP-201ENST00000355238 CLRN2A0PK11 232 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 PDZK1P1A8MUH7 402 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 SERPINB5P36952 375 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 RINLQ6ZS11 566 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 WDR70Q9NW82 654 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 RABGEF1Q9UJ41 708 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 TPST1O60507 370 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 RALBP11234 206 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 RSBN1Q5VWQ0 802 aaPredicted RBP13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 EIF1ADQ8N9N8 165 aaKnown RBP13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 NEDD1Q8NHV4 660 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 CENPTQ96BT3 561 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 ECSITQ9BQ95 431 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 CORO1CQ9ULV4 474 aaPredicted RBP13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 GSTT1P30711 240 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 CHRNB3Q05901 458 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZNF844Q08AG5 666 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 PDCD6IPQ8WUM4 868 aaKnown RBP13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 C19orf60Q96EN9 201 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 LACRTQ9GZZ8 138 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 THAP2Q9H0W7 228 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 MROH7Q68CQ1 1323 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 SARSP49591 514 aaKnown RBP13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 SFSWAPQ12872 951 aaKnown RBP13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 TAS2R42Q7RTR8 314 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 FAM81AQ8TBF8 368 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 LRRC39Q96DD0 335 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 AGAP3Q96P47 875 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 FAM118BQ9BPY3 351 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 MYRFQ9Y2G1 1151 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 EVPLLA8MZ36 301 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 PTENP60484 403 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 PTPAQ15257 358 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 Q4G0T1 1027 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 CDKAL1Q5VV42 579 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 LRRN4CLQ8ND94 238 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 RNPEPQ9H4A4 650 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 ZNF302Q9NR11 478 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 IMPAD1Q9NX62 359 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 COMMD3-BMI1R4GMX3 469 aa13.23□□□□□ -0.29
SYNCRIP-201ENST00000355238 MAGI3Q5TCQ9 1506 aa13.22□□□□□ -0.29
SYNCRIP-201ENST00000355238 C1orf232A0A0U1RR37 186 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms