RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 PHLPP2Q6ZVD8 1323 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 STK36Q9NRP7 1315 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 ASPMQ8IZT6 3477 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 TULP2O00295 520 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 WNT7AO00755 349 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 MSNP26038 577 aaKnown RBP12.17□□□□□ -0.46
RTN3-204ENST00000354497 MAPK8P45983 427 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 PEX3P56589 373 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 SPAG1Q07617 926 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 RUNX3Q13761 415 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 SEZ6Q53EL9 994 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 TTC30AQ86WT1 665 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 TTC9BQ8N6N2 239 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 ATAD1Q8NBU5 361 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 KIFAP3Q92845 792 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 PSMG2Q969U7 264 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 LPIN3Q9BQK8 851 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 POLR3CQ9BUI4 534 aaPredicted RBP12.17□□□□□ -0.46
RTN3-204ENST00000354497 TARS2Q9BW92 718 aaKnown RBP12.17□□□□□ -0.46
RTN3-204ENST00000354497 SLC32A1Q9H598 525 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 ZSWIM6Q9HCJ5 1215 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 PDRG1Q9NUG6 133 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 ANKFY1Q9P2R3 1169 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 ORC3Q9UBD5 711 aaPredicted RBP12.17□□□□□ -0.46
RTN3-204ENST00000354497 KLK13Q9UKR3 277 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 NOL7Q9UMY1 257 aaKnown RBP12.17□□□□□ -0.46
RTN3-204ENST00000354497 ASB3Q9Y575 518 aa12.17□□□□□ -0.46
RTN3-204ENST00000354497 UQCRHLA0A096LP55 91 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 MTMR11A4FU01 709 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 OR6C75A6NL08 312 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 TRDMT1O14717 391 aaKnown RBP12.16□□□□□ -0.46
RTN3-204ENST00000354497 UQCRHP07919 91 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 MCF2P10911 925 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 ARSAP15289 507 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 MCM7P33993 719 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 MATR3P43243 847 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■□□□ 13.3
RTN3-204ENST00000354497 DHPSP49366 369 aaPredicted RBP12.16□□□□□ -0.46
RTN3-204ENST00000354497 AMPD2Q01433 879 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 BFSP1Q12934 665 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 GPR17Q13304 367 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 DMC1Q14565 340 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 VEPH1Q14D04 833 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 NAIF1Q69YI7 327 aaPredicted RBP12.16□□□□□ -0.46
RTN3-204ENST00000354497 CENPPQ6IPU0 288 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 ARMCX5Q6P1M9 558 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 CC2D1AQ6P1N0 951 aaPredicted RBP12.16□□□□□ -0.46
RTN3-204ENST00000354497 C19orf48Q6RUI8 117 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 BEST2Q8NFU1 509 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 TSTD1Q8NFU3 115 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 WASF1Q92558 559 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 PIGKQ92643 395 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 CHFRQ96EP1 664 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 P2RY13Q9BPV8 354 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 OXCT2Q9BYC2 517 aaPredicted RBP12.16□□□□□ -0.46
RTN3-204ENST00000354497 TMEM60Q9H2L4 133 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 BHMT2Q9H2M3 363 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 FBRSL1Q9HCM7 1045 aaKnown RBP12.16□□□□□ -0.46
RTN3-204ENST00000354497 HPS4Q9NQG7 708 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 NEUROG3Q9Y4Z2 214 aa12.16□□□□□ -0.46
RTN3-204ENST00000354497 KIF26AQ9ULI4 1882 aaPredicted RBP12.16□□□□□ -0.46
RTN3-204ENST00000354497 SDK1Q7Z5N4 2213 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 SPAARA0A1B0GVQ0 90 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 DRD1P21728 446 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 CDC25CP30307 473 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 AVPR1AP37288 418 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 GALK1P51570 392 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 MGAT5BQ3V5L5 792 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 USP39Q53GS9 565 aaKnown RBP12.15□□□□□ -0.46
RTN3-204ENST00000354497 OVOS1Q6IE37 1185 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 MPZL3Q6UWV2 235 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 TMEM92Q6UXU6 159 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 GIPC2Q8TF65 315 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 TNFRSF25Q93038 417 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 EXOC4Q96A65 974 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 COL26A1Q96A83 441 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 ACDQ96AP0 544 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 SLC46A2Q9BY10 475 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 CCL26Q9Y258 94 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 ZFYVE26Q68DK2 2539 aa12.15□□□□□ -0.46
RTN3-204ENST00000354497 ZZEF1O43149 2961 aa12.14□□□□□ -0.47
RTN3-204ENST00000354497 NUP210Q8TEM1 1887 aaPredicted RBP12.14□□□□□ -0.47
RTN3-204ENST00000354497 OTOL1A6NHN0 477 aaPredicted RBP12.14□□□□□ -0.47
RTN3-204ENST00000354497 M0QZQ0 153 aa12.14□□□□□ -0.47
RTN3-204ENST00000354497 TAF4O00268 1085 aa12.14□□□□□ -0.47
RTN3-204ENST00000354497 CDX4O14627 284 aaPredicted RBP12.14□□□□□ -0.47
RTN3-204ENST00000354497 MEFVO15553 781 aaPredicted RBP12.14□□□□□ -0.47
RTN3-204ENST00000354497 REC8O95072 547 aa12.14□□□□□ -0.47
RTN3-204ENST00000354497 OAZ2O95190 189 aa12.14□□□□□ -0.47
RTN3-204ENST00000354497 ZIC2O95409 532 aaPredicted RBP12.14□□□□□ -0.47
RTN3-204ENST00000354497 CCT6AP40227 531 aaKnown RBP12.14□□□□□ -0.47
RTN3-204ENST00000354497 NPTX2P47972 431 aa12.14□□□□□ -0.47
RTN3-204ENST00000354497 IRX4P78413 519 aa12.14□□□□□ -0.47
RTN3-204ENST00000354497 SIM1P81133 766 aaPredicted RBP12.14□□□□□ -0.47
RTN3-204ENST00000354497 HMGN5P82970 282 aaKnown RBP12.14□□□□□ -0.47
RTN3-204ENST00000354497 DMP1Q13316 513 aaPredicted RBP12.14□□□□□ -0.47
RTN3-204ENST00000354497 PMS2CLQ68D20 193 aa12.14□□□□□ -0.47
RTN3-204ENST00000354497 ARMCX6Q7L4S7 300 aa12.14□□□□□ -0.47
RTN3-204ENST00000354497 SYT13Q7L8C5 426 aa12.14□□□□□ -0.47
RTN3-204ENST00000354497 C11orf74Q86VG3 221 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms