RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 SKA1Q96BD8 255 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 VCPIP1Q96JH7 1222 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 UIMC1Q96RL1 719 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 PAFAH2Q99487 392 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 SERPINI1Q99574 410 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 RTFDC1Q9BY42 306 aaPredicted RBP12.9□□□□□ -0.34
TRERF1-202ENST00000354325 NOCTQ9UK39 431 aaKnown RBP12.9□□□□□ -0.34
TRERF1-202ENST00000354325 SERPINB8P50452 374 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 COG7P83436 770 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 ARHGEF19Q8IW93 802 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 FBXL13Q8NEE6 735 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 PLEKHG4BQ96PX9 1271 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 TEKT3Q9BXF9 490 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
TRERF1-202ENST00000354325 C1orf21Q9H246 121 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 ZDHHC7Q9NXF8 308 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 PLK2Q9NYY3 685 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 AGTPBP1Q9UPW5 1226 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
TRERF1-202ENST00000354325 KLF11O14901 512 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 CSDE1O75534 798 aaKnown RBP12.9□□□□□ -0.34
TRERF1-202ENST00000354325 CLPTM1O96005 669 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 ASLP04424 464 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 SLC16A2P36021 539 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 NFX1Q12986 1120 aaKnown RBP12.9□□□□□ -0.34
TRERF1-202ENST00000354325 CDC16Q13042 620 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 ULK2Q8IYT8 1036 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 AZIN2Q96A70 460 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 SLC4A9Q96Q91 983 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 FRMD8Q9BZ67 464 aaPredicted RBP12.9□□□□□ -0.34
TRERF1-202ENST00000354325 STN1Q9H668 368 aaKnown RBP12.9□□□□□ -0.34
TRERF1-202ENST00000354325 ACSS3Q9H6R3 686 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 TMEM8AQ9HCN3 771 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 LMCD1Q9NZU5 365 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 GGA1Q9UJY5 639 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 PCDHB2Q9Y5E7 798 aa12.9□□□□□ -0.34
TRERF1-202ENST00000354325 ITGA2BP08514 1039 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 CETPP11597 493 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 CPA3P15088 417 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 TMED1Q13445 227 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 GRAMD1BQ3KR37 738 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 RARS2Q5T160 578 aaKnown RBP12.9□□□□□ -0.35
TRERF1-202ENST00000354325 UBAP2Q5T6F2 1119 aaKnown RBP12.9□□□□□ -0.35
TRERF1-202ENST00000354325 SLFN13Q68D06 897 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 ADGRD1Q6QNK2 874 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 RINLQ6ZS11 566 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 MYLK4Q86YV6 388 aaPredicted RBP12.9□□□□□ -0.35
TRERF1-202ENST00000354325 PPP4R1Q8TF05 950 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 FAM163AQ96GL9 167 aaPredicted RBP12.9□□□□□ -0.35
TRERF1-202ENST00000354325 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 PCDHB18PQ96TA0 734 aa12.9□□□□□ -0.35
TRERF1-202ENST00000354325 RAB15P59190 212 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 TAP1Q03518 808 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 KRT81Q14533 505 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 CC2D2BQ6DHV5 1058 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 C1orf228Q6PIY5 440 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 C3orf62Q6ZUJ4 267 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 MCOLN2Q8IZK6 566 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 RFWD2Q8NHY2 731 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 KCNK16Q96T55 309 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 G3BP2Q9UN86 482 aaKnown RBP12.89□□□□□ -0.35
TRERF1-202ENST00000354325 SNED1Q8TER0 1413 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 MSH4O15457 936 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 CHMP2AO43633 222 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 ATP2B4P23634 1241 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 ABCD1P33897 745 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 MAP3K10Q02779 954 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 ANKRD20A4Q4UJ75 823 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 KCTD1Q719H9 257 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 PRPF39Q86UA1 669 aaKnown RBP12.89□□□□□ -0.35
TRERF1-202ENST00000354325 SLC26A7Q8TE54 656 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 WDR60Q8WVS4 1066 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 NRG4Q8WWG1 115 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
TRERF1-202ENST00000354325 CLMNQ96JQ2 1002 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 PCIF1Q9H4Z3 704 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 KRT82Q9NSB4 513 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 APOBEC2Q9Y235 224 aaKnown RBP12.89□□□□□ -0.35
TRERF1-202ENST00000354325 KIAA1551Q9HCM1 1747 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 HNRNPDQ14103 355 aaKnown RBP12.89□□□□□ -0.35
TRERF1-202ENST00000354325 MAPK6Q16659 721 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 KCTD19Q17RG1 926 aaPredicted RBP12.89□□□□□ -0.35
TRERF1-202ENST00000354325 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
TRERF1-202ENST00000354325 TMEM117Q9H0C3 514 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 HSPBP1Q9NZL4 362 aa12.89□□□□□ -0.35
TRERF1-202ENST00000354325 CYP3A4P08684 503 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 AKR1B1P15121 316 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 ADARP55265 1226 aaKnown RBP12.88□□□□□ -0.35
TRERF1-202ENST00000354325 GTF2IP78347 998 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 ZNF200P98182 395 aaPredicted RBP12.88□□□□□ -0.35
TRERF1-202ENST00000354325 KDSRQ06136 332 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 KCNA1Q09470 495 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 PPP2R5CQ13362 524 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 MYBPC3Q14896 1274 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 KAZNQ674X7 775 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 SLC47A2Q86VL8 602 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 E2F7Q96AV8 911 aa12.88□□□□□ -0.35
TRERF1-202ENST00000354325 C7orf26Q96N11 449 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms