RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 LARP4BQ92615 738 aaKnown RBP11.14□□□□□ -0.63
PKP1-202ENST00000352845 NSMCE3Q96MG7 304 aa11.14□□□□□ -0.63
PKP1-202ENST00000352845 TRABDQ9H4I3 376 aa11.14□□□□□ -0.63
PKP1-202ENST00000352845 PALMDQ9NP74 551 aa11.14□□□□□ -0.63
PKP1-202ENST00000352845 ATAD3AQ9NVI7 634 aa11.14□□□□□ -0.63
PKP1-202ENST00000352845 GIN1Q9NXP7 522 aa11.14□□□□□ -0.63
PKP1-202ENST00000352845 HDAC9Q9UKV0 1011 aa11.14□□□□□ -0.63
PKP1-202ENST00000352845 RAB26Q9ULW5 256 aa11.14□□□□□ -0.63
PKP1-202ENST00000352845 PLA2G4CQ9UP65 541 aa11.14□□□□□ -0.63
PKP1-202ENST00000352845 SQORQ9Y6N5 450 aa11.14□□□□□ -0.63
PKP1-202ENST00000352845 TXNDC9O14530 226 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 SORBS3O60504 671 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 ZBED4O75132 1171 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 CDH3P22223 829 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 PRDX5P30044 214 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 HOXD11P31277 338 aaPredicted RBP11.13□□□□□ -0.63
PKP1-202ENST00000352845 FDFT1P37268 417 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 DLGAP5Q15398 846 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 TMEM132AQ24JP5 1023 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 DCDC5Q6ZRR9 648 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 RHOT2Q8IXI1 618 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 SEPT12Q8IYM1 358 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 ANKK1Q8NFD2 765 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 RIN3Q8TB24 985 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 ALG3Q92685 438 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 RAD54LQ92698 747 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 CCDC68Q9H2F9 335 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 LRRC19Q9H756 370 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 KANSL2Q9H9L4 492 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 SLC7A8Q9UHI5 535 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 POLIQ9UNA4 740 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 MAST2Q6P0Q8 1798 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 FOXO6A8MYZ6 492 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 ANKRD63C9JTQ0 380 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 FAM47E-STBD1D6RA91 191 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 ITM2AO43736 263 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 ONECUT3O60422 494 aaPredicted RBP11.13□□□□□ -0.63
PKP1-202ENST00000352845 USP1O94782 785 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 IL1BP01584 269 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 CETPP11597 493 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 CA4P22748 312 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 RXRGP48443 463 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 NCKAP1LP55160 1127 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 NOP14P78316 857 aaKnown RBP11.13□□□□□ -0.63
PKP1-202ENST00000352845 KCNC4Q03721 635 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 TNIP1Q15025 636 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 TCEAL1Q15170 157 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 ARL13BQ3SXY8 428 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 PARP10Q53GL7 1025 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 C12orf60Q5U649 245 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 TMC7Q7Z402 723 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 DNAAF5Q86Y56 855 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 SLC30A5Q8TAD4 765 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 TBCKQ8TEA7 893 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 DNAJC19Q96DA6 116 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 TMEM47Q9BQJ4 181 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 GPATCH1Q9BRR8 931 aaKnown RBP11.13□□□□□ -0.63
PKP1-202ENST00000352845 NDEL1Q9GZM8 345 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 KLC2Q9H0B6 622 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 DCTN4Q9UJW0 460 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 SNX9Q9Y5X1 595 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 CNTNAP4Q9C0A0 1308 aa11.13□□□□□ -0.63
PKP1-202ENST00000352845 A0A0G2JND7 137 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 SMCO2A6NFE2 343 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 RSPH10B2B2RC85 870 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 SLC37A4O43826 429 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 CAPN15O75808 1086 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 RSPH10BP0C881 870 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 TKTP29401 623 aaKnown RBP11.12□□□□□ -0.63
PKP1-202ENST00000352845 HMOX2P30519 316 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 EIF2B2P49770 351 aaKnown RBP11.12□□□□□ -0.63
PKP1-202ENST00000352845 FXR2P51116 673 aaKnown RBP eCLIP11.12□□□□□ -0.63
PKP1-202ENST00000352845 NAPAP54920 295 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 RPS3AP61247 264 aaKnown RBP11.12□□□□□ -0.63
PKP1-202ENST00000352845 SEPT7Q16181 437 aaKnown RBP11.12□□□□□ -0.63
PKP1-202ENST00000352845 ECM1Q16610 540 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 ZNF829Q3KNS6 432 aaPredicted RBP11.12□□□□□ -0.63
PKP1-202ENST00000352845 TMEM119Q4V9L6 283 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 EFHC1Q5JVL4 640 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 METTL21CQ5VZV1 264 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 PPP4R3CPQ6ZMV5 832 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 LARGE2Q8N3Y3 721 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 RFWD2Q8NHY2 731 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 USP33Q8TEY7 942 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 CHPT1Q8WUD6 406 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 CFAP57Q96MR6 1250 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 ZSWIM1Q9BR11 485 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 VPS11Q9H270 941 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 CLK4Q9HAZ1 481 aaKnown RBP11.12□□□□□ -0.63
PKP1-202ENST00000352845 OSGEPQ9NPF4 335 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 MCM9Q9NXL9 1143 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 IGSF9Q9P2J2 1179 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 GRID1Q9ULK0 1009 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 MINPP1Q9UNW1 487 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 TIMM22Q9Y584 194 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 TAF1LQ8IZX4 1826 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 KIF13BQ9NQT8 1826 aa11.12□□□□□ -0.63
PKP1-202ENST00000352845 POTEMA6NI47 508 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms