RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 ECT2Q9H8V3 914 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 CISHQ9NSE2 258 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 GGT7Q9UJ14 662 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 PPP2R3BQ9Y5P8 575 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 FAM189A1O60320 539 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 TOM1L1O75674 476 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 ITGAVP06756 1048 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 TAC1P20366 129 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 GCAP28676 217 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 CDH5P33151 784 aaPredicted RBP23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 GSCP56915 257 aaPredicted RBP23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 MYL6P60660 151 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 CNTN2Q02246 1040 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 FSTL1Q12841 308 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 RIPK1Q13546 671 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 CCDC142Q17RM4 750 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 SGSM1Q2NKQ1 1148 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 NOL9Q5SY16 702 aaKnown RBP23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 FAM160B1Q5W0V3 765 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 GPAT2Q6NUI2 795 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 TCHPQ9BT92 498 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 MTMR12Q9C0I1 747 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 RXFP1Q9HBX9 757 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 AFG3L2Q9Y4W6 797 aa23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.2■■□□□ 1.3
NKX2-4-201ENST00000351817 MAFO75444 373 aaPredicted RBP23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 ETS1P14921 441 aa23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 UBA1P22314 1058 aaKnown RBP23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 EIF4BP23588 611 aaKnown RBP23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 ADCY1Q08828 1119 aa23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 SURF1Q15526 300 aa23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 ZBTB33Q86T24 672 aa23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 ERICH1Q86X53 443 aa23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 TCP11Q8WWU5 503 aa23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 NOD2Q9HC29 1040 aa23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 KLHL14Q9P2G3 628 aa23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 PCDHGC3Q9UN70 934 aa23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 SHOC2Q9UQ13 582 aa23.19■■□□□ 1.3
NKX2-4-201ENST00000351817 LRRD1A4D1F6 860 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 TTLL13PA6NNM8 815 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 MSCO60682 206 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 FARP2O94887 1054 aaPredicted RBP23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 NQO1P15559 274 aaKnown RBP23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 CDKN2BP42772 138 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 ALDH5A1P51649 535 aaPredicted RBP23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 DUOXA2Q1HG44 320 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 RNF43Q68DV7 783 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 CGB2Q6NT52 195 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 TACO1Q9BSH4 297 aaKnown RBP23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 PPCSQ9HAB8 311 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 PCDH9Q9HC56 1237 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 CEP83Q9Y592 693 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 WDR90Q96KV7 1748 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 ALOX15BO15296 676 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 STAT5BP51692 787 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 ACVR2BQ13705 512 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 PRKG1Q13976 671 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 ZNF394Q53GI3 561 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 RNASEH2BQ5TBB1 312 aaKnown RBP23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 TXNRD3NBQ6F5E7 133 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 SMYD5Q6GMV2 418 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 DLK2Q6UY11 383 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 CEP57Q86XR8 500 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 PRPF31Q8WWY3 499 aaKnown RBP23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 SENP1Q9P0U3 644 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 BAIAP2L1Q9UHR4 511 aa23.18■■□□□ 1.3
NKX2-4-201ENST00000351817 OGTO15294 1046 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 PRPF4O43172 522 aaKnown RBP eCLIP23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 FOXN2P32314 431 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 SLC18A1P54219 525 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 WDR4P57081 412 aaKnown RBP23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 TRPC3Q13507 836 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 CENPUQ71F23 418 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 PNMA8AQ86V59 439 aaPredicted RBP23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 WDTC1Q8N5D0 677 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 NCAPGQ9BPX3 1015 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 SBF1O95248 1867 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 POC1B-GALNT4F8VUJ3 575 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 ASMTLO95671 621 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 ZNF268Q14587 947 aaPredicted RBP23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 FASTKD3Q14CZ7 662 aaKnown RBP23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 WDR72Q3MJ13 1102 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 POLNQ7Z5Q5 900 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 ACO2Q99798 780 aaKnown RBP23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 PITPNM3Q9BZ71 974 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 VPS37BQ9H9H4 285 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 STRIP2Q9ULQ0 834 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 PPME1Q9Y570 386 aa23.17■■□□□ 1.3
NKX2-4-201ENST00000351817 USP2O75604 605 aaPredicted RBP23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 EZRP15311 586 aaKnown RBP23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 MAP2K2P36507 400 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 PLCB3Q01970 1234 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 IER5Q5VY09 327 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 FITM2Q8N6M3 262 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 SLC35B2Q8TB61 432 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 ACSF2Q96CM8 615 aaPredicted RBP23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 HAUS1Q96CS2 278 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 TRABDQ9H4I3 376 aa23.16■■□□□ 1.3
NKX2-4-201ENST00000351817 SMG5Q9UPR3 1016 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms