RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 DHX35Q9H5Z1 703 aaKnown RBP12.78□□□□□ -0.36
SMAD9-201ENST00000350148 PRDM16Q9HAZ2 1276 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 SETD4Q9NVD3 440 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 MAFBQ9Y5Q3 323 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-201ENST00000350148 RPSAP08865 295 aaKnown RBP12.78□□□□□ -0.36
SMAD9-201ENST00000350148 SULT1E1P49888 294 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 SH3TC2Q8TF17 1288 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 KRT35Q92764 455 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 ISCUQ9H1K1 167 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 SAYSD1Q9NPB0 183 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 ZNF214Q9UL59 606 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-201ENST00000350148 DERAQ9Y315 318 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 ANKRD63C9JTQ0 380 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 CRCPO75575 148 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 DNAJC8O75937 253 aaPredicted RBP12.78□□□□□ -0.36
SMAD9-201ENST00000350148 MMEP08473 750 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 CASP5P51878 434 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 CYP4F22Q6NT55 531 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 LRRC1Q9BTT6 524 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 TMEM106CQ9BVX2 250 aa12.78□□□□□ -0.36
SMAD9-201ENST00000350148 GOLGA8QA0A0J9YX86 632 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 GOLGA8OA6NCC3 632 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 GOLGA8NF8WBI6 632 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 PROSCO94903 275 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 PTENP60484 403 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 KRT17Q04695 432 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.36
SMAD9-201ENST00000350148 MTA1Q13330 715 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 STAT4Q14765 748 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 ACAP1Q15027 740 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 PDK2Q15119 407 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 FOXR1Q6PIV2 292 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 NDUFAF2Q8N183 169 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 ATP11CQ8NB49 1132 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 CLMNQ96JQ2 1002 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 KLHL8Q9P2G9 620 aaPredicted RBP12.77□□□□□ -0.36
SMAD9-201ENST00000350148 LCP1P13796 627 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 MYL6P60660 151 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 PDE1BQ01064 536 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 ELAVL2Q12926 359 aaKnown RBP12.77□□□□□ -0.36
SMAD9-201ENST00000350148 SLC13A5Q86YT5 568 aaPredicted RBP12.77□□□□□ -0.36
SMAD9-201ENST00000350148 ARMC2Q8NEN0 867 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 GPR20Q99678 358 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 RRN3Q9NYV6 651 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 SENP1Q9P0U3 644 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 PCDHB7Q9Y5E2 793 aa12.77□□□□□ -0.36
SMAD9-201ENST00000350148 THP07101 528 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 CPB1P15086 417 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 EIF3EP60228 445 aaKnown RBP12.77□□□□□ -0.37
SMAD9-201ENST00000350148 ZNF268Q14587 947 aaPredicted RBP12.77□□□□□ -0.37
SMAD9-201ENST00000350148 ANKRD20A3Q5VUR7 823 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 IZUMO3Q5VZ72 239 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 KCTD16Q68DU8 428 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 NKX2-3Q8TAU0 364 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 SEPT8Q92599 483 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 SLC8A2Q9UPR5 921 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 ZBTB39O15060 712 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 F9P00740 461 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 PPARGP37231 505 aaPredicted RBP12.77□□□□□ -0.37
SMAD9-201ENST00000350148 ARL1P40616 181 aaPredicted RBP12.77□□□□□ -0.37
SMAD9-201ENST00000350148 MAP3K10Q02779 954 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 TRIP13Q15645 432 aaPredicted RBP12.77□□□□□ -0.37
SMAD9-201ENST00000350148 EPM2AIP1Q7L775 607 aaPredicted RBP12.77□□□□□ -0.37
SMAD9-201ENST00000350148 BCAS4Q8TDM0 211 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 ACO2Q99798 780 aaKnown RBP12.77□□□□□ -0.37
SMAD9-201ENST00000350148 FZD1Q9UP38 647 aa12.77□□□□□ -0.37
SMAD9-201ENST00000350148 TGFB1I1O43294 461 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 SPAG6O75602 509 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 KRT38O76015 456 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 MAGEA9P43362 315 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 THOC5Q13769 683 aaKnown RBP12.76□□□□□ -0.37
SMAD9-201ENST00000350148 MTHFD1LQ6UB35 978 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 VSIG1Q86XK7 387 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 C1orf131Q8NDD1 294 aaKnown RBP12.76□□□□□ -0.37
SMAD9-201ENST00000350148 ARHGEF26Q96DR7 871 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 MAGEB5Q9BZ81 275 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 SUN1O94901 812 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 CCNE2O96020 404 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 EIF4BP23588 611 aaKnown RBP12.76□□□□□ -0.37
SMAD9-201ENST00000350148 FBXO47Q5MNV8 452 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 RWDD4Q6NW29 188 aaKnown RBP12.76□□□□□ -0.37
SMAD9-201ENST00000350148 EP400NLQ6ZTU2 488 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 UNC93AQ86WB7 457 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 EXD1Q8NHP7 514 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 XPNPEP3Q9NQH7 507 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 C2CD2Q9Y426 696 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 RIPK3Q9Y572 518 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 CIB2O75838 187 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 CA4P22748 312 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 GPS1Q13098 491 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 CAPSQ13938 189 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 FAXDC2Q96IV6 333 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 AMACRQ9UHK6 382 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 BTBD19C9JJ37 291 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 CXCL8P10145 99 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 VSNL1P62760 191 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 PPP2R5DQ14738 602 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms