RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 CPP00450 1065 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 FTLP02792 175 aaPredicted RBP14.25□□□□□ -0.13
UBA3-201ENST00000349511 ANXA13P27216 316 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 ASPAP45381 313 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 AFF1P51825 1210 aaKnown RBP14.25□□□□□ -0.13
UBA3-201ENST00000349511 C2CD6Q53TS8 623 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 ZNF667Q5HYK9 610 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 PEX26Q7Z412 305 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 MAATS1Q7Z4T9 603 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 APBB1IPQ7Z5R6 666 aaPredicted RBP14.25□□□□□ -0.13
UBA3-201ENST00000349511 SLFN11Q7Z7L1 901 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 MICALL1Q8N3F8 863 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 EIF1ADQ8N9N8 165 aaKnown RBP14.25□□□□□ -0.13
UBA3-201ENST00000349511 C1orf131Q8NDD1 294 aaKnown RBP14.25□□□□□ -0.13
UBA3-201ENST00000349511 HPDLQ96IR7 371 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.25□□□□□ -0.134e-10■■■■□ 26
UBA3-201ENST00000349511 SMYD3Q9H7B4 428 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 C2CD2Q9Y426 696 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 PCDHB2Q9Y5E7 798 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 FRMPD3Q5JV73 1810 aa14.25□□□□□ -0.13
UBA3-201ENST00000349511 KBTBD13C9JR72 458 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 BHMG1C9JSJ3 638 aaPredicted RBP14.24□□□□□ -0.13
UBA3-201ENST00000349511 PGRMC1O00264 195 aaKnown RBP14.24□□□□□ -0.13
UBA3-201ENST00000349511 NDUFAB1O14561 156 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 ATMINO43313 823 aaPredicted RBP14.24□□□□□ -0.13
UBA3-201ENST00000349511 HSPA6P17066 643 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 NR1D1P20393 614 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 GNA15P30679 374 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 CDR2Q01850 454 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 GUCY1A3Q02108 690 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 PTK7Q13308 1070 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 CUL1Q13616 776 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 FBXO47Q5MNV8 452 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 CEP85LQ5SZL2 805 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 ALKAL1Q6UXT8 129 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 PHLDB2Q86SQ0 1253 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 DDX42Q86XP3 938 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBA3-201ENST00000349511 RNF169Q8NCN4 708 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 ARHGEF26Q96DR7 871 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 CALR3Q96L12 384 aaKnown RBP14.24□□□□□ -0.13
UBA3-201ENST00000349511 SDCBP2Q9H190 292 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 OSGEPQ9NPF4 335 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 WBP1LQ9NX94 342 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 CACNG4Q9UBN1 327 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 ATP8B3O60423 1300 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 A0A0A6YYK5 440 aaPredicted RBP14.24□□□□□ -0.13
UBA3-201ENST00000349511 SMIM28A0A1B0GU29 152 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 HMGB1P1B2RPK0 211 aaPredicted RBP14.24□□□□□ -0.13
UBA3-201ENST00000349511 SART1O43290 800 aaKnown RBP14.24□□□□□ -0.13
UBA3-201ENST00000349511 THAP12O43422 761 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 MGEA5O60502 916 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 LSP1P33241 339 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 LPIN1Q14693 890 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 RASGEF1CQ8N431 466 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 CPA5Q8WXQ8 436 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 FAM81BQ96LP2 452 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 DDX47Q9H0S4 455 aaKnown RBP14.24□□□□□ -0.13
UBA3-201ENST00000349511 NEUROG2Q9H2A3 272 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 TMBIM4Q9HC24 238 aa14.24□□□□□ -0.13
UBA3-201ENST00000349511 KRIT1O00522 736 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 GPR182O15218 404 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 CKBP12277 381 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 HSD17B3P37058 310 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 TRIM71Q2Q1W2 868 aaKnown RBP14.23□□□□□ -0.13
UBA3-201ENST00000349511 LRIG3Q6UXM1 1119 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 TSEN34Q9BSV6 310 aaKnown RBP14.23□□□□□ -0.13
UBA3-201ENST00000349511 PLEKHA5Q9HAU0 1116 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 FAM105AQ9NUU6 356 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 CNTN3Q9P232 1028 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 HMGXB4Q9UGU5 601 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 INTUQ9ULD6 942 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 CCDC188H7C350 402 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 CCL5P13501 91 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 ITGA4P13612 1032 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 BRD2P25440 801 aaKnown RBP14.23□□□□□ -0.13
UBA3-201ENST00000349511 MLH1P40692 756 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 LIG3P49916 1009 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 ATN1P54259 1190 aaPredicted RBP14.23□□□□□ -0.13
UBA3-201ENST00000349511 RBP5P82980 135 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 SOX4Q06945 474 aaPredicted RBP14.23□□□□□ -0.13
UBA3-201ENST00000349511 UAP1Q16222 522 aaPredicted RBP14.23□□□□□ -0.13
UBA3-201ENST00000349511 DAAM2Q86T65 1068 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 RPAINQ86UA6 219 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 NT5DC3Q86UY8 548 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 SYCE1Q8N0S2 351 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 CTNNBL1Q8WYA6 563 aaPredicted RBP14.23□□□□□ -0.13
UBA3-201ENST00000349511 CYFIP2Q96F07 1278 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 EPN3Q9H201 632 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 ITGA11Q9UKX5 1188 aa14.23□□□□□ -0.13
UBA3-201ENST00000349511 H0YGN5 161 aa14.22□□□□□ -0.13
UBA3-201ENST00000349511 ARVCFO00192 962 aa14.22□□□□□ -0.13
UBA3-201ENST00000349511 MDH1P40925 334 aaKnown RBP14.22□□□□□ -0.13
UBA3-201ENST00000349511 POU5F1Q01860 360 aaKnown RBP14.22□□□□□ -0.13
UBA3-201ENST00000349511 ZBTB6Q15916 424 aa14.22□□□□□ -0.13
UBA3-201ENST00000349511 KCTD19Q17RG1 926 aaPredicted RBP14.22□□□□□ -0.13
UBA3-201ENST00000349511 B4GALNT4Q76KP1 1039 aa14.22□□□□□ -0.13
UBA3-201ENST00000349511 DPH6Q7L8W6 267 aa14.22□□□□□ -0.13
UBA3-201ENST00000349511 UBR7Q8N806 425 aa14.22□□□□□ -0.13
UBA3-201ENST00000349511 BEST2Q8NFU1 509 aa14.22□□□□□ -0.13
UBA3-201ENST00000349511 OR2W6PQ8NHA6 318 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms