RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 WDR72Q3MJ13 1102 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 SLC39A12Q504Y0 691 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 INTS6LQ5JSJ4 861 aaKnown RBP23.69■■□□□ 1.38
SNX3-202ENST00000349379 DCP1BQ8IZD4 617 aaKnown RBP23.69■■□□□ 1.38
SNX3-202ENST00000349379 C2orf15Q8WU43 125 aaKnown RBP23.69■■□□□ 1.38
SNX3-202ENST00000349379 ACSF2Q96CM8 615 aaPredicted RBP23.69■■□□□ 1.38
SNX3-202ENST00000349379 MYADMQ96S97 322 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 POLIQ9UNA4 740 aa23.69■■□□□ 1.38
SNX3-202ENST00000349379 TSPY1Q01534 308 aa23.68■■□□□ 1.38
SNX3-202ENST00000349379 TWF1Q12792 350 aa23.68■■□□□ 1.38
SNX3-202ENST00000349379 TTC9BQ8N6N2 239 aa23.68■■□□□ 1.38
SNX3-202ENST00000349379 SPPL2BQ8TCT7 592 aa23.68■■□□□ 1.38
SNX3-202ENST00000349379 DUSP9Q99956 384 aaKnown RBP23.68■■□□□ 1.38
SNX3-202ENST00000349379 TMLHEQ9NVH6 421 aa23.68■■□□□ 1.38
SNX3-202ENST00000349379 CEP72Q9P209 647 aa23.68■■□□□ 1.38
SNX3-202ENST00000349379 EPS15L1Q9UBC2 864 aa23.68■■□□□ 1.38
SNX3-202ENST00000349379 MUTYHQ9UIF7 546 aa23.68■■□□□ 1.38
SNX3-202ENST00000349379 NME7Q9Y5B8 376 aa23.68■■□□□ 1.38
SNX3-202ENST00000349379 DCXO43602 365 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 HCRTO43612 131 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 ASS1P00966 412 aaKnown RBP23.67■■□□□ 1.38
SNX3-202ENST00000349379 FSHRP23945 695 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 PCSK1P29120 753 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 GTF2H1P32780 548 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 TNNC1P63316 161 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 ZNF699Q32M78 642 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 NELFBQ8WX92 580 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 CEP63Q96MT8 703 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 MRPL45Q9BRJ2 306 aaKnown RBP23.67■■□□□ 1.38
SNX3-202ENST00000349379 DNAJC25Q9H1X3 360 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 TMEM8AQ9HCN3 771 aa23.67■■□□□ 1.38
SNX3-202ENST00000349379 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.67■■□□□ 1.384e-14■■□□□ 11.5
SNX3-202ENST00000349379 HLA-DRAP01903 254 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 RHOP08100 348 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 PTPN2P17706 415 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 ACAT1P24752 427 aaKnown RBP23.66■■□□□ 1.38
SNX3-202ENST00000349379 GCLMP48507 274 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 EPHA5P54756 1037 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 PLD1Q13393 1074 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 NFE2Q16621 373 aaPredicted RBP23.66■■□□□ 1.38
SNX3-202ENST00000349379 SGSM1Q2NKQ1 1148 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 PABPC1LQ4VXU2 614 aaKnown RBP23.66■■□□□ 1.38
SNX3-202ENST00000349379 KLHL10Q6JEL2 608 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 FAM171BQ6P995 826 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 GET4Q7L5D6 327 aaPredicted RBP23.66■■□□□ 1.38
SNX3-202ENST00000349379 TAF4BQ92750 862 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 MMS19Q96T76 1030 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 EPHX3Q9H6B9 360 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 SLC27A5Q9Y2P5 690 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 TECTAO75443 2155 aa23.66■■□□□ 1.38
SNX3-202ENST00000349379 BICDL2A1A5D9 508 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 ALADP13716 330 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 LMO2P25791 158 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 TUFMP49411 452 aaKnown RBP23.65■■□□□ 1.38
SNX3-202ENST00000349379 SLC5A9Q2M3M2 681 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 ZNF667Q5HYK9 610 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 PRSS36Q5K4E3 855 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 ITFG1Q8TB96 612 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 SYT15Q9BQS2 421 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 LRRC3Q9BY71 257 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 NUP62CLQ9H1M0 184 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 NXF1Q9UBU9 619 aaKnown RBP23.65■■□□□ 1.38
SNX3-202ENST00000349379 CDH9Q9ULB4 789 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 CTNND2Q9UQB3 1225 aa23.65■■□□□ 1.38
SNX3-202ENST00000349379 ZFP37Q9Y6Q3 630 aaPredicted RBP23.65■■□□□ 1.38
SNX3-202ENST00000349379 ZNF638Q14966 1978 aaKnown RBP23.65■■□□□ 1.38
SNX3-202ENST00000349379 HAPLN1P10915 354 aaPredicted RBP23.64■■□□□ 1.37
SNX3-202ENST00000349379 LAMP2P13473 410 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 GBP2P32456 591 aaPredicted RBP23.64■■□□□ 1.37
SNX3-202ENST00000349379 PIK3CAP42336 1068 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 PAK1Q13153 545 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 PTPN21Q16825 1174 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 CCDC142Q17RM4 750 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 KRT39Q6A163 491 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 FILIP1Q7Z7B0 1213 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 ELMOD1Q8N336 334 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 GPT2Q8TD30 523 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 TAS1R2Q8TE23 839 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 ZNF512Q96ME7 567 aaPredicted RBP23.64■■□□□ 1.37
SNX3-202ENST00000349379 ABCB6Q9NP58 842 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 CRTAC1Q9NQ79 661 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 ABI2Q9NYB9 513 aaPredicted RBP23.64■■□□□ 1.37
SNX3-202ENST00000349379 LIMD1Q9UGP4 676 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 GTF3C4Q9UKN8 822 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 CDH7Q9ULB5 785 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 PCDHB5Q9Y5E4 795 aa23.64■■□□□ 1.37
SNX3-202ENST00000349379 MYBPHLA2RUH7 354 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 ATP2C2O75185 946 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 SOAT2O75908 522 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 ATF6P18850 670 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 ALDH1A3P47895 512 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 CFAP221Q4G0U5 840 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 TMC8Q8IU68 726 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 LEMD2Q8NC56 503 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 NUP210Q8TEM1 1887 aaPredicted RBP23.63■■□□□ 1.37
SNX3-202ENST00000349379 FGF13Q92913 245 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 ELMO3Q96BJ8 720 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 FUBP3Q96I24 572 aaKnown RBP eCLIP23.63■■□□□ 1.37
SNX3-202ENST00000349379 CORO1BQ9BR76 489 aa23.63■■□□□ 1.37
SNX3-202ENST00000349379 SDCBP2Q9H190 292 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms