RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 NCKAP1LP55160 1127 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 ELF3P78545 371 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 SPIRE1Q08AE8 756 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 PABPC4Q13310 644 aaKnown RBP eCLIP8.33□□□□□ -1.084e-7■■■■□ 24.1
UBE2D3-204ENST00000349311 BIRC3Q13489 604 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 KIAA0753Q2KHM9 967 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 HSP90AA4PQ58FG1 418 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 AGBL2Q5U5Z8 902 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 OTUD7BQ6GQQ9 843 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 MIS18BP1Q6P0N0 1132 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 ABHD17CQ6PCB6 329 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 BZW1Q7L1Q6 419 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 B3GNT8Q7Z7M8 397 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 FOXP4Q8IVH2 680 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 KBTBD3Q8NAB2 608 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 ARRDC4Q8NCT1 418 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 SPATA20Q8TB22 786 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 WASF1Q92558 559 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 FBXW5Q969U6 566 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 HVCN1Q96D96 273 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 DTNBP1Q96EV8 351 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 GDAP1L1Q96MZ0 367 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 CELF4Q9BZC1 486 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 GOLGA2P5Q9HBQ8 144 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 SLC39A2Q9NP94 309 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 INTS7Q9NVH2 962 aaKnown RBP8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 RNF14Q9UBS8 474 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 SWAP70Q9UH65 585 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 NARFQ9UHQ1 456 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 CCNL1Q9UK58 526 aaPredicted RBP8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 CBLCQ9ULV8 474 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 HYOU1Q9Y4L1 999 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 TELO2Q9Y4R8 837 aa8.33□□□□□ -1.08
UBE2D3-204ENST00000349311 EME2A4GXA9 379 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 EYA2O00167 538 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 PLSCR1O15162 318 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 MAFKO60675 156 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 USO1O60763 962 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 NPTXRO95502 500 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 RPSAP08865 295 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 PAEPP09466 180 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 PYGMP11217 842 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 COL6A2P12110 1019 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 GCLCP48506 637 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 CTSWP56202 376 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 HERVK_113P62684 666 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 HTRA3P83110 453 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 CUL4BQ13620 913 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 SSPNQ14714 243 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 SEPT2Q15019 361 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 SAFBQ15424 915 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 CR1LQ2VPA4 569 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 CCDC181Q5TID7 509 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 GKAP1Q5VSY0 366 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 KRT40Q6A162 431 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 C8orf74Q6P047 294 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 SLC30A9Q6PML9 568 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 PTF1AQ7RTS3 328 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 FAM129CQ86XR2 697 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 C1QL4Q86Z23 238 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 IQCKQ8N0W5 287 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 EIF1ADQ8N9N8 165 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 CCDC63Q8NA47 563 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 DRAXINQ8NBI3 349 aaPredicted RBP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 NSMCE1Q8WV22 266 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 ZFAND2BQ8WV99 257 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 CLEC4DQ8WXI8 215 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 IQCDQ96DY2 449 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 RRP36Q96EU6 259 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 CCDC43Q96MW1 224 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 GSDMAQ96QA5 445 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 KCNJ15Q99712 375 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 NUP58Q9BVL2 599 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 IRAK4Q9NWZ3 460 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 MYOTQ9UBF9 498 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 HDAC6Q9UBN7 1215 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 BAIAP2L1Q9UHR4 511 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 SNX12Q9UMY4 172 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 REXO2Q9Y3B8 237 aaKnown RBP8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 PCDHB4Q9Y5E5 795 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 MYH7BA7E2Y1 1941 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 MYH1P12882 1939 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 ABCC12Q96J65 1359 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 CCDC88AQ3V6T2 1871 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 ANKRD31Q8N7Z5 1873 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 KIAA1551Q9HCM1 1747 aa8.32□□□□□ -1.08
UBE2D3-204ENST00000349311 STK36Q9NRP7 1315 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 KRTAP9-6A0A140TA67 174 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 TCAF2A6NFQ2 919 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 ZNF561-AS1K7EIQ3 104 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 SH2B2O14492 632 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 IFIT3O14879 490 aaKnown RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 PRC1O43663 620 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 NTSR2O95665 410 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 GNAT1P11488 350 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 PFKLP17858 780 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 IBSPP21815 317 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 CCND1P24385 295 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 MC3RP41968 323 aa8.31□□□□□ -1.08
UBE2D3-204ENST00000349311 LINC00310P59036 64 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms