RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 OSGEPQ9NPF4 335 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 AAASQ9NRG9 546 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 CNNM1Q9NRU3 951 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 BLOC1S4Q9NUP1 217 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 FETUBQ9UGM5 382 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 TBK1Q9UHD2 729 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 ANAPC5Q9UJX4 755 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 RAB26Q9ULW5 256 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 RTCBQ9Y3I0 505 aaKnown RBP8.55□□□□□ -1.04
ATG4A-201ENST00000343524 RABGAP1Q9Y3P9 1069 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 TSC22D4Q9Y3Q8 395 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 SQORQ9Y6N5 450 aa8.55□□□□□ -1.04
ATG4A-201ENST00000343524 IQCA1LA6NCM1 817 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 BOLA2-SMG1P6H3BVE0 249 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 FBP2O00757 339 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 CASQ2O14958 399 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 CALUO43852 315 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 CCNT1O60563 726 aaKnown RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 DKC1O60832 514 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 CLASP2O75122 1294 aaKnown RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 BAIAP3O94812 1187 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 PON1P27169 355 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 GNA11P29992 359 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 SOX5P35711 763 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 TUBA4AP68366 448 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 RELAQ04206 551 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 ITGA7Q13683 1181 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 HIC1Q14526 733 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 USP41Q3LFD5 358 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 NADK2Q4G0N4 442 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 EFHC1Q5JVL4 640 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 UBAP2Q5T6F2 1119 aaKnown RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 RC3H1Q5TC82 1133 aaKnown RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 LDHAL6AQ6ZMR3 332 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 TREML1Q86YW5 311 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 CCDC89Q8N998 374 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 ALG3Q92685 438 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 OXNAD1Q96HP4 312 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 BRIP1Q9BX63 1249 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 PALMDQ9NP74 551 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 DDX18Q9NVP1 670 aaKnown RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 HESX1Q9UBX0 185 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 RSL24D1Q9UHA3 163 aaKnown RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 TAGLN3Q9UI15 199 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 SORCS3Q9UPU3 1222 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 PTPN22Q9Y2R2 807 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 MROH5Q6ZUA9 1318 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 A0A0G2JND7 137 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 MINDY4BA8MYZ0 360 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 TXNDC9O14530 226 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 MTA2O94776 668 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 OR6B1O95007 311 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 PDE8BO95263 885 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 ESRRBO95718 433 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 TFAP2AP05549 437 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 PDGFRBP09619 1106 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 ITGA8P53708 1063 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 CENPCQ03188 943 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 TRIM28Q13263 835 aaKnown RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 ZNF423Q2M1K9 1284 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 TMEM119Q4V9L6 283 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 SGO2Q562F6 1265 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 LVRNQ6Q4G3 990 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 RAPH1Q70E73 1250 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 DYMQ7RTS9 669 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 CHSY1Q86X52 802 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 NLGN1Q8N2Q7 840 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 TTLL11Q8NHH1 800 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 PPP1R14CQ8TAE6 165 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 LNX1Q8TBB1 728 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 SREK1Q8WXA9 508 aaKnown RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 RAPGEF4Q8WZA2 1011 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 BHMTQ93088 406 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 BORCS5Q969J3 196 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 PANX3Q96QZ0 392 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 NAP1L4Q99733 375 aaKnown RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 CCT7Q99832 543 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 TSSK1BQ9BXA7 367 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 TMEM120AQ9BXJ8 343 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 OSBPL6Q9BZF3 934 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 BARHL2Q9NY43 387 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 GCNT4Q9P109 453 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 PSMC3IPQ9P2W1 217 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 GPC6Q9Y625 555 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-201ENST00000343524 ALG6Q9Y672 507 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 NUMBLQ9Y6R0 609 aa8.54□□□□□ -1.04
ATG4A-201ENST00000343524 LTBP1Q14766 1721 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 B2RBV5 119 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 ANKRD63C9JTQ0 380 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 H3BRJ5 948 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 ATP2A1O14983 1001 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 LSM1O15116 133 aaKnown RBP8.53□□□□□ -1.04
ATG4A-201ENST00000343524 TYROBPO43914 113 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 PGM3O95394 542 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 TNFAIP3P21580 790 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 NR2F2P24468 414 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 TECP42680 631 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 CREB5Q02930 508 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 EPHA7Q15375 998 aa8.53□□□□□ -1.04
ATG4A-201ENST00000343524 DLGAP5Q15398 846 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms