RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 ATP8B4Q8TF62 1192 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 GFM2Q969S9 779 aaKnown RBP8.44□□□□□ -1.06
UBE4B-202ENST00000343090 WWP1Q9H0M0 922 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 RIOX1Q9H6W3 641 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 GTF3C4Q9UKN8 822 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 LZTS1Q9Y250 596 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 ZBTB39O15060 712 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 TSPY1Q01534 308 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 NOP9Q86U38 636 aaKnown RBP8.44□□□□□ -1.06
UBE4B-202ENST00000343090 NCLNQ969V3 563 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 NMD3Q96D46 503 aaKnown RBP8.44□□□□□ -1.06
UBE4B-202ENST00000343090 SUN2Q9UH99 717 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 TRIM33Q9UPN9 1127 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 ORC6Q9Y5N6 252 aa8.44□□□□□ -1.06
UBE4B-202ENST00000343090 UBA6A0AVT1 1052 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 CYP11B1P15538 503 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 TMED10P49755 219 aaKnown RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 TPI1P60174 286 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 RBP5P82980 135 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 MXD4Q14582 209 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 SLC10A5Q5PT55 438 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 RABGAP1LQ5R372 815 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 TAS1R2Q8TE23 839 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 SCG3Q8WXD2 468 aaKnown RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 SH3GL2Q99962 352 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 SPON2Q9BUD6 331 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 GDF3Q9NR23 364 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 TMEM150BA6NC51 233 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 P4HA2O15460 535 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 SNX2O60749 519 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 HNRNPCL1O60812 293 aaKnown RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 GYS1P13807 737 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 AMPD2Q01433 879 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 STX3Q13277 289 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 CUL2Q13617 745 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 ANGPTL8Q6UXH0 198 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 FRA10AC1Q70Z53 315 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 HAUS8Q9BT25 410 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 NIF3L1Q9GZT8 377 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 MYOZ2Q9NPC6 264 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 USP20Q9Y2K6 914 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 NFIBO00712 420 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 KIAA0391O15091 583 aaKnown RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 HSPA8P11142 646 aaKnown RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 NPTX2P47972 431 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 PRAMEP78395 509 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 AMHR2Q16671 573 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 QPCTQ16769 361 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 ITPRIPL1Q6GPH6 555 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 EFCAB12Q6NXP0 572 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 ZNF720Q7Z2F6 126 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 COL23A1Q86Y22 540 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 VGLL2Q8N8G2 317 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 EZH1Q92800 747 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 ROPN1BQ9BZX4 212 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 DRC3Q9H069 523 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 ROPN1Q9HAT0 212 aaPredicted RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 TNS2Q63HR2 1409 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 PDE5AO76074 875 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 RRM1P23921 792 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 HADHAP40939 763 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 BTKQ06187 659 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 HIC1Q14526 733 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 MROH9Q5TGP6 573 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 ANO5Q75V66 913 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 DDIASQ8IXT1 998 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 OR6J1Q8NGC5 347 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 ZNF507Q8TCN5 953 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 SIKE1Q9BRV8 207 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 MTMR12Q9C0I1 747 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 RANBP17Q9H2T7 1088 aaKnown RBP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 PLEKHA5Q9HAU0 1116 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 SP110Q9HB58 689 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 RXFP1Q9HBX9 757 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.43□□□□□ -1.06
UBE4B-202ENST00000343090 BLOC1S4Q9NUP1 217 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 GGA3Q9NZ52 723 aa8.43□□□□□ -1.06
UBE4B-202ENST00000343090 ARHGEF37A1IGU5 675 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 FAM86B1E9PN63 330 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 AGPSO00116 658 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 ADCY3O60266 1144 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 ITGB3P05106 788 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 ICAM1P05362 532 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 CTSHP09668 335 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 FAM86B2P0C5J1 330 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 KRT4P19013 534 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 SOX11P35716 441 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 CENPCQ03188 943 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 EFTUD2Q15029 972 aaKnown RBP eCLIP8.42□□□□□ -1.064e-8■■□□□ 13.2
UBE4B-202ENST00000343090 GOLGA7BQ2TAP0 167 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 THTPAQ9BU02 230 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 SHCBP1LQ9BZQ2 653 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 DEFB129Q9H1M3 183 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 DCLRE1BQ9H816 532 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 RMI1Q9H9A7 625 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 ANKEF1Q9NU02 776 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 POLIQ9UNA4 740 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 O00370 1275 aa8.42□□□□□ -1.06
UBE4B-202ENST00000343090 SHMT1P34896 483 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms