RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 TTC39CQ8N584 583 aa18.22■□□□□ 0.51
FRMD4A-202ENST00000342409 LPIN3Q9BQK8 851 aa18.22■□□□□ 0.51
FRMD4A-202ENST00000342409 NT5C1AQ9BXI3 368 aa18.22■□□□□ 0.51
FRMD4A-202ENST00000342409 TJP2Q9UDY2 1190 aa18.22■□□□□ 0.51
FRMD4A-202ENST00000342409 L1RE1Q9UN81 338 aa18.22■□□□□ 0.51
FRMD4A-202ENST00000342409 KCNK3O14649 394 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 MED7O43513 233 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 HSPA6P17066 643 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 COMTP21964 271 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 PNPLA4P41247 253 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 MARCKSL1P49006 195 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 MAMLD1Q13495 774 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 PTPN20Q4JDL3 420 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 PPP1R2P3Q6NXS1 205 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 ECHDC2Q86YB7 292 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 HACE1Q8IYU2 909 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 C12orf29Q8N999 325 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 ALG3Q92685 438 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 RABGGTAQ92696 567 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 KRT35Q92764 455 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 RNF208Q9H0X6 261 aa18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 TSPYL2Q9H2G4 693 aaPredicted RBP18.21■□□□□ 0.51
FRMD4A-202ENST00000342409 TTC3P53804 2025 aa18.21■□□□□ 0.5
FRMD4A-202ENST00000342409 THP07101 528 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 C2orf54Q08AI8 447 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 SGO2Q562F6 1265 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 OSTM1Q86WC4 334 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 C3orf58Q8NDZ4 430 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 CAGE1Q8TC20 777 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 HEXIM2Q96MH2 286 aaKnown RBP18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 RPS6KC1Q96S38 1066 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 DPEP3Q9H4B8 488 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 ANKZF1Q9H8Y5 726 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 ANAPC7Q9UJX3 599 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 MICAL3Q7RTP6 2002 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 C9IYK1 514 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 PFKMP08237 780 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 GPD2P43304 727 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 ITIH3Q06033 890 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 SV2CQ496J9 727 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 PPP1R15BQ5SWA1 713 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 LIN9Q5TKA1 542 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 LCLAT1Q6UWP7 414 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 LRRC8DQ7L1W4 858 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 ACOT1Q86TX2 421 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 PBKQ96KB5 322 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 PAAF1Q9BRP4 392 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 RSAD1Q9HA92 442 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 RGS18Q9NS28 235 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 KIAA1257Q9ULG3 409 aa18.2■□□□□ 0.5
FRMD4A-202ENST00000342409 NBNO60934 754 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 SELPP16109 830 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 LMO2P25791 158 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 PEX5P50542 639 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 CLCNKBP51801 687 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 PKDCCQ504Y2 493 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 CYP4A22Q5TCH4 519 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 UNC93AQ86WB7 457 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 ERICH1Q86X53 443 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 RASGEF1CQ8N431 466 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 PDCL2Q8N4E4 241 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 RNF169Q8NCN4 708 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 SPATA4Q8NEY3 305 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 CPXM1Q96SM3 734 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 SEZ6LQ9BYH1 1024 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 SLC38A7Q9NVC3 462 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 RNF14Q9UBS8 474 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 PTPRDP23468 1912 aa18.19■□□□□ 0.5
FRMD4A-202ENST00000342409 FNDC1Q4ZHG4 1894 aaPredicted RBP18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 M0QYV0 167 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 INPPL1O15357 1258 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 CALB1P05937 261 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 RPL7AP62424 266 aaKnown RBP18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 FAM189BP81408 668 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 PPP1R26Q5T8A7 1209 aaPredicted RBP18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 CD300LGQ6UXG3 332 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 OR6B3Q8NGW1 331 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 UBA3Q8TBC4 463 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 RPGRIP1Q96KN7 1286 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 CRISPLD2Q9H0B8 497 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 TSPAN16Q9UKR8 245 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 NLRC5Q86WI3 1866 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 PODXLO00592 558 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 CEP104O60308 925 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 H2AFXP16104 143 aaPredicted RBP18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 IBSPP21815 317 aaPredicted RBP18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 WARSP23381 471 aaKnown RBP18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 CTNNA2P26232 953 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 RNASE9P60153 205 aaKnown RBP18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 ZNF252P-AS1Q0IIN9 211 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 TCTN1Q2MV58 587 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 CFAP221Q4G0U5 840 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 TTC30AQ86WT1 665 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 CRYBG2Q8N1P7 616 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 MMGT1Q8N4V1 131 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 TOP6BLQ8N6T0 577 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 GPR161Q8N6U8 529 aaKnown RBP18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 MSANTD4Q8NCY6 345 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 ACTRT1Q8TDG2 376 aa18.18■□□□□ 0.5
FRMD4A-202ENST00000342409 RBM12Q9NTZ6 932 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms