RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ADPGKQ9BRR6 497 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 DDX60LQ5H9U9 1706 aaKnown RBP13.2□□□□□ -0.3
LMX1A-202ENST00000342310 MCF2LO15068 1137 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 MAPTP10636 758 aaKnown RBP13.2□□□□□ -0.3
LMX1A-202ENST00000342310 RXRBP28702 533 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 EPHB2P29323 1055 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 MAN1A1P33908 653 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 COPS2P61201 443 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 GRM1Q13255 1194 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 C15orf59Q2T9L4 293 aaPredicted RBP13.2□□□□□ -0.3
LMX1A-202ENST00000342310 SH3PXD2AQ5TCZ1 1133 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 VSIG10LQ86VR7 867 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 HACE1Q8IYU2 909 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 CCNYQ8ND76 341 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 TLCD1Q96CP7 247 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 CCDC124Q96CT7 223 aaKnown RBP13.2□□□□□ -0.3
LMX1A-202ENST00000342310 ACSS2Q9NR19 701 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.2□□□□□ -0.3
LMX1A-202ENST00000342310 XPO7Q9UIA9 1087 aaKnown RBP13.2□□□□□ -0.3
LMX1A-202ENST00000342310 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
LMX1A-202ENST00000342310 GOLGA4Q13439 2230 aaKnown RBP13.2□□□□□ -0.3
LMX1A-202ENST00000342310 ARHGAP42A6NI28 874 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 TOM1L1O75674 476 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 FAM155BO75949 473 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 ITGB3P05106 788 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 CYP1A2P05177 515 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 PRKCBP05771 671 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 NQO1P15559 274 aaKnown RBP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 HOXA7P31268 230 aaPredicted RBP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 BACE1P56817 501 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 LRRC6Q86X45 466 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 CCDC110Q8TBZ0 833 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 ZFP69BQ9UJL9 534 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 SCINQ9Y6U3 715 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 NUDT17P0C025 328 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 FOXN2P32314 431 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 GBP1P32455 592 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 PTGER2P43116 358 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 GPC3P51654 580 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 CRADDP78560 199 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 DUOXA2Q1HG44 320 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 MUM1Q2TAK8 710 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 ANKRD22Q5VYY1 191 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 STYK1Q6J9G0 422 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 FBXO16Q8IX29 292 aaPredicted RBP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 NME8Q8N427 588 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 NUDCD1Q96RS6 583 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 ADAM7Q9H2U9 754 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 AAASQ9NRG9 546 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 PIM2Q9P1W9 311 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 IP6K2Q9UHH9 426 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 KCNN4O15554 427 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 ENTPD5O75356 428 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 TROVE2P10155 538 aaKnown RBP eCLIP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 ATP2A2P16615 1042 aaKnown RBP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 ABCG1P45844 678 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 GDF10P55107 478 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 DALRD3Q5D0E6 543 aaKnown RBP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 MROH9Q5TGP6 573 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 ZCCHC23Q6ZST2 131 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 CROCCP2Q86T23 111 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 SLC9A9Q8IVB4 645 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 ZC3H3Q8IXZ2 948 aaKnown RBP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 TMEM192Q8IY95 271 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 NLRP7Q8WX94 980 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 AGAP3Q96P47 875 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 MYLK2Q9H1R3 596 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 IL1RAPL1Q9NZN1 696 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 INPP5FQ9Y2H2 1132 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 MYO18AQ92614 2054 aaKnown RBP13.19□□□□□ -0.3
LMX1A-202ENST00000342310 NAV1Q8NEY1 1877 aa13.19□□□□□ -0.3
LMX1A-202ENST00000342310 VTNP04004 478 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 PDGFRAP16234 1089 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 DENND1BQ6P3S1 775 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 C12orf29Q8N999 325 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 RNF169Q8NCN4 708 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 CFAP61Q8NHU2 1237 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 PSPC1Q8WXF1 523 aaKnown RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 ANKRD36BP1Q96IX9 119 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 SPATA33Q96N06 139 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 ZNF317Q96PQ6 595 aaPredicted RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 ANKEF1Q9NU02 776 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 PPARGC1AQ9UBK2 798 aaKnown RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 P4HA2O15460 535 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 OATP04181 439 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 HSD17B4P51659 736 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 SESN2P58004 480 aaPredicted RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 TMPRSS15P98073 1019 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 SLC1A5Q15758 541 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 DCAF15Q66K64 600 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 PDCD7Q8N8D1 485 aaKnown RBP13.18□□□□□ -0.3
LMX1A-202ENST00000342310 TFAP2BQ92481 460 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 LPAR1Q92633 364 aa13.18□□□□□ -0.3
LMX1A-202ENST00000342310 STMN2Q93045 179 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms