RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 RDM1Q8NG50 284 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 PDE9AO76083 593 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 SLC1A1P43005 524 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 PLCL1Q15111 1095 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 ARHGAP15Q53QZ3 475 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 GPD1LQ8N335 351 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 ANAPC2Q9UJX6 822 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 ARHGEF10O15013 1369 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 PDE8BO95263 885 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 ASNSP08243 561 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 MAPK1P28482 360 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 CCT3P49368 545 aaKnown RBP14.43□□□□□ -0.1
PDE4D-203ENST00000340635 NKX1-1Q15270 411 aaPredicted RBP14.43□□□□□ -0.1
PDE4D-203ENST00000340635 ATL2Q8NHH9 583 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 GREM2Q9H772 168 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 FEM1BQ9UK73 627 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 N6AMT1Q9Y5N5 214 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 NUP160Q12769 1436 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 SFNP31947 248 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 ADRM1Q16186 407 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 PHACTR4Q8IZ21 702 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 RAET1EQ8TD07 263 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 SPIRE2Q8WWL2 714 aa14.43□□□□□ -0.1
PDE4D-203ENST00000340635 AP3D1O14617 1153 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 WARSP23381 471 aaKnown RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 ADORA1P30542 326 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 FNTAP49354 379 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 PTK7Q13308 1070 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 SNRNP48Q6IEG0 339 aaKnown RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 ULK3Q6PHR2 472 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 LIMA1Q9UHB6 759 aaKnown RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 RNF112Q9ULX5 631 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 USP15Q9Y4E8 981 aaPredicted RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 TAF4O00268 1085 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 IFNA14P01570 189 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 PTPN1P18031 435 aaKnown RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 ORC2Q13416 577 aaPredicted RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 SENP2Q9HC62 589 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 NMRK2Q9NPI5 230 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 IL1RAPL1Q9NZN1 696 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 TRMT6Q9UJA5 497 aaKnown RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 NUDT2P50583 147 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 TGM3Q08188 693 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 PIN4Q9Y237 131 aaKnown RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 PCDHB6Q9Y5E3 794 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 H3BMM5 538 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 NCK2O43639 380 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 EIF2S3P41091 472 aaKnown RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 VPS33AQ96AX1 596 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 NACC2Q96BF6 587 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 MCRS1Q96EZ8 462 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 FAM153AQ9UHL3 310 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 SCGNO76038 276 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 ITGA3P26006 1051 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 TOMM20Q15388 145 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 ZNF668Q96K58 619 aaPredicted RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 INTS2Q9H0H0 1204 aaKnown RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 SMIM22K7EJ46 135 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 CHRNB3Q05901 458 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 DDX39BQ13838 428 aaKnown RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 DDR2Q16832 855 aa14.42□□□□□ -0.1
PDE4D-203ENST00000340635 KNOP1Q1ED39 458 aaKnown RBP14.42□□□□□ -0.1
PDE4D-203ENST00000340635 PCNAP12004 261 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 S100GP29377 79 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 ETFBP38117 255 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 ALDH1A3P47895 512 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 SWSAP1Q6NVH7 229 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 CYFIP1Q7L576 1253 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 IPMKQ8NFU5 416 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 FCER1AP12319 257 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 PKP1Q13835 747 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 SYTL1Q8IYJ3 562 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 NEUROD4Q9HD90 331 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 ZNF682O95780 498 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 CHN1P15882 459 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 TAB1Q15750 504 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 FAM83EQ2M2I3 478 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 CCDC144BQ3MJ40 725 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 CYP4A22Q5TCH4 519 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 C18orf8Q96DM3 657 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 FAM129BQ96TA1 746 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 CINPQ9BW66 212 aaPredicted RBP14.41□□□□□ -0.1
PDE4D-203ENST00000340635 DLGAP2Q9P1A6 1054 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 SNX8Q9Y5X2 465 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 MGAT4DA6NG13 374 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 FAM220BPB1ANY3 271 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 PSTPIP1O43586 416 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 BMP10O95393 424 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 PCCAP05165 728 aaPredicted RBP14.41□□□□□ -0.1
PDE4D-203ENST00000340635 TSNQ15631 228 aaKnown RBP14.41□□□□□ -0.1
PDE4D-203ENST00000340635 FAM83BQ5T0W9 1011 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 RWDD3Q9Y3V2 267 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 A0A1W2PP64 1363 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 FAM47DPA6NHR8 397 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 ACADSP16219 412 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 ATP6V1B2P21281 511 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 KIAA0408Q6ZU52 694 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 LINC00301Q8NCQ3 95 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 NFKBIZQ9BYH8 718 aa14.41□□□□□ -0.1
PDE4D-203ENST00000340635 STK33Q9BYT3 514 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms