RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 OR6P1Q8NGX9 317 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 TMC2Q8TDI7 906 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 TMEM134Q9H6X4 195 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 ZBTB39O15060 712 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 RGS16O15492 202 aaPredicted RBP13.47□□□□□ -0.25
LIN54-201ENST00000340417 UCHL3P15374 230 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 KCNA3P22001 575 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 SYTL3Q4VX76 610 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 TMEM86AQ8N2M4 240 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 EDEM3Q9BZQ6 932 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 VPS28Q9UK41 221 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 GABRQQ9UN88 632 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 TRAV19A0A0A6YYK7 116 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 CCDC66A2RUB6 948 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 ZNF197O14709 1029 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 LZTS3O60299 673 aaPredicted RBP13.47□□□□□ -0.25
LIN54-201ENST00000340417 GLRA2P23416 452 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 KLC3Q6P597 504 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 PCGF5Q86SE9 256 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 C17orf53Q8N3J3 647 aaPredicted RBP13.47□□□□□ -0.25
LIN54-201ENST00000340417 EXT2Q93063 718 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 GMLQ99445 158 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 TSSK1BQ9BXA7 367 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 ABHD10Q9NUJ1 306 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 PLCH1Q4KWH8 1693 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 UBA6A0AVT1 1052 aaPredicted RBP13.47□□□□□ -0.25
LIN54-201ENST00000340417 ITGB5P18084 799 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 CTNNA1P35221 906 aaKnown RBP13.47□□□□□ -0.25
LIN54-201ENST00000340417 THEMIS2Q5TEJ8 643 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 ARMC6Q6NXE6 501 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 TMEM176AQ96HP8 235 aa13.47□□□□□ -0.25
LIN54-201ENST00000340417 STN1Q9H668 368 aaKnown RBP13.47□□□□□ -0.25
LIN54-201ENST00000340417 AFF4Q9UHB7 1163 aaKnown RBP13.47□□□□□ -0.25
LIN54-201ENST00000340417 SLC9A3R1O14745 358 aaPredicted RBP13.46□□□□□ -0.25
LIN54-201ENST00000340417 TKTL1P51854 596 aa13.46□□□□□ -0.25
LIN54-201ENST00000340417 EPC2Q52LR7 807 aa13.46□□□□□ -0.25
LIN54-201ENST00000340417 DMAP1Q9NPF5 467 aaPredicted RBP13.46□□□□□ -0.25
LIN54-201ENST00000340417 OLA1Q9NTK5 396 aaKnown RBP13.46□□□□□ -0.25
LIN54-201ENST00000340417 LRRC37A3O60309 1634 aa13.46□□□□□ -0.25
LIN54-201ENST00000340417 GLUD2P49448 558 aa13.46□□□□□ -0.25
LIN54-201ENST00000340417 PIGHQ14442 188 aaPredicted RBP13.46□□□□□ -0.25
LIN54-201ENST00000340417 C1orf131Q8NDD1 294 aaKnown RBP13.46□□□□□ -0.25
LIN54-201ENST00000340417 ZBTB45Q96K62 511 aaPredicted RBP13.46□□□□□ -0.25
LIN54-201ENST00000340417 INPP4AQ96PE3 977 aaPredicted RBP13.46□□□□□ -0.25
LIN54-201ENST00000340417 NCKAP1Q9Y2A7 1128 aa13.46□□□□□ -0.25
LIN54-201ENST00000340417 ATRNL1Q5VV63 1379 aa13.46□□□□□ -0.25
LIN54-201ENST00000340417 PALMO75781 387 aa13.46□□□□□ -0.25
LIN54-201ENST00000340417 TOB1P50616 345 aaPredicted RBP13.46□□□□□ -0.25
LIN54-201ENST00000340417 ZC3H18Q86VM9 953 aaKnown RBP13.46□□□□□ -0.25
LIN54-201ENST00000340417 ANKRD42Q8N9B4 389 aa13.46□□□□□ -0.25
LIN54-201ENST00000340417 BPIFA3Q9BQP9 254 aa13.46□□□□□ -0.25
LIN54-201ENST00000340417 C11orf84Q9BUA3 381 aaPredicted RBP13.46□□□□□ -0.25
LIN54-201ENST00000340417 SLC9A1P19634 815 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 MSH2P43246 934 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 DCLRE1AQ6PJP8 1040 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 TRIM48Q8IWZ4 208 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 RGL4Q8IZJ4 473 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 FRMPD4Q14CM0 1322 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.46□□□□□ -0.26
LIN54-201ENST00000340417 RHOCP08134 193 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 BST2Q10589 180 aaKnown RBP13.46□□□□□ -0.26
LIN54-201ENST00000340417 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.26
LIN54-201ENST00000340417 CCDC6Q16204 474 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 CEP68Q76N32 757 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 INTS13Q9NVM9 706 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 STK39Q9UEW8 545 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 TSR3Q9UJK0 312 aaKnown RBP13.46□□□□□ -0.26
LIN54-201ENST00000340417 TNFSF13BQ9Y275 285 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 FHOD1Q9Y613 1164 aa13.46□□□□□ -0.26
LIN54-201ENST00000340417 FGGP02679 453 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 EPHB2P29323 1055 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 GUCY2DQ02846 1103 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 GET4Q7L5D6 327 aaPredicted RBP13.45□□□□□ -0.26
LIN54-201ENST00000340417 FAM114A2Q9NRY5 505 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 CRYBG1Q9Y4K1 1723 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 IRS2Q9Y4H2 1338 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 NHSL1Q5SYE7 1610 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 F9P00740 461 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 SPOPLQ6IQ16 392 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 TSHZ1Q6ZSZ6 1077 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 DHX40Q8IX18 779 aaKnown RBP13.45□□□□□ -0.26
LIN54-201ENST00000340417 NPLOC4Q8TAT6 608 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 RSPH14Q9UHP6 348 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 TBC1D3BA6NDS4 549 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 TRIM60Q495X7 471 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 AP1M1Q9BXS5 423 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 ROBO3Q96MS0 1386 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 PLTPP55058 493 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 MGARPQ8TDB4 240 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 RIPOR3Q96MK2 946 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 DNAJC18Q9H819 358 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 KLHL11Q9NVR0 708 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 BARX2Q9UMQ3 279 aaPredicted RBP13.45□□□□□ -0.26
LIN54-201ENST00000340417 A0A1W2PQC6 194 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 MAPK13O15264 365 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 NDUFS2O75306 463 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 RALBP11234 206 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 BDNFP23560 247 aa13.45□□□□□ -0.26
LIN54-201ENST00000340417 ASPHQ12797 758 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms