RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 NRLP54845 237 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 ADCY2Q08462 1091 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 FAM110CQ1W6H9 321 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 ZC3H18Q86VM9 953 aaKnown RBP10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 RFX6Q8HWS3 928 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 EXOC8Q8IYI6 725 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 LPPQ93052 612 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 ZFP42Q96MM3 310 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 ELOVL4Q9GZR5 314 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 STYXL1Q9Y6J8 313 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 SCINQ9Y6U3 715 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 OTOFQ9HC10 1997 aa10.76□□□□□ -0.69
RBFOX1-202ENST00000340209 GAS2O43903 313 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 SHBGP04278 402 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 IFNAR2P48551 515 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 NUMBP49757 651 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 CENPCQ03188 943 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 PTPN11Q06124 597 aaPredicted RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 CUL1Q13616 776 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 TAF5Q15542 800 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 C15orf59Q2T9L4 293 aaPredicted RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 GOLGA7BQ2TAP0 167 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 RAB6CQ53S08 254 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 SH3PXD2AQ5TCZ1 1133 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 CDCA2Q69YH5 1023 aaPredicted RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 SHCBP1Q8NEM2 672 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 IPO4Q8TEX9 1081 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 TRIM11Q96F44 468 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 CALR3Q96L12 384 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 C9orf72Q96LT7 481 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 RAB6CQ9H0N0 254 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 FAM114A2Q9NRY5 505 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 PCDHA3Q9Y5H8 950 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 HNRNPH2P55795 449 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 OGDHQ02218 1023 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 SURF1Q15526 300 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 NDRG1Q92597 394 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 CAPS2Q9BXY5 557 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 SEMA4AQ9H3S1 761 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 MYADML2A6NDP7 307 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 DCDC2CA8MYV0 355 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 ASAP2O43150 1006 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 MICAL2O94851 1124 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 GAS8O95995 478 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 PIGRP01833 764 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 P4HA1P13674 534 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 ELNP15502 786 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 CHRNA3P32297 505 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 PEX5P50542 639 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 ITIH3Q06033 890 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 MYO1EQ12965 1108 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 ANKRD23Q86SG2 305 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 TMEM40Q8WWA1 233 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 RAPGEF5Q92565 580 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 PIWIL1Q96J94 861 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 PAIP2Q9BPZ3 127 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 MRPL45Q9BRJ2 306 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 DDX23Q9BUQ8 820 aaKnown RBP10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 B3GNT5Q9BYG0 378 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 FAM53CQ9NYF3 392 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 PTPRFP10586 1907 aa10.75□□□□□ -0.69
RBFOX1-202ENST00000340209 MKI67P46013 3256 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 I3L4J1 428 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 CCDC130P13994 396 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 MAGOHP61326 146 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 TRIM32Q13049 653 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 MAP2K5Q13163 448 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 SCUBE3Q8IX30 993 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 RASGEF1CQ8N431 466 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 KCTD6Q8NC69 237 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 RPS6KC1Q96S38 1066 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 TSPAN16Q9UKR8 245 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 HEY1Q9Y5J3 304 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 E5RJQ4 531 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 CALB1P05937 261 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 NR1D1P20393 614 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 CCT5P48643 541 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 CRHR2Q13324 411 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 SLC29A2Q14542 456 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 ANKS1BQ7Z6G8 1248 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 ANKRD42Q8N9B4 389 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 MDM1Q8TC05 714 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 ZMAT2Q96NC0 199 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 TMEM121Q9BTD3 319 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 MED10Q9BTT4 135 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 DPEP3Q9H4B8 488 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 HESX1Q9UBX0 185 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 CYTH4Q9UIA0 394 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 PARP14Q460N5 1801 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 LCTP09848 1927 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 ZNFX1Q9P2E3 1918 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 IGKV6-21A0A0C4DH24 114 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 MEIS3P2A8K0S8 358 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 CD48P09326 243 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 YWHAEP62258 255 aaKnown RBP10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 RBP5P82980 135 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 GRB14Q14449 540 aa10.74□□□□□ -0.69
RBFOX1-202ENST00000340209 LONRF1Q17RB8 773 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms